Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 E2F6P2-201ENST00000420708 748 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 MRPL48P1-201ENST00000445390 636 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 PGAM1P13-201ENST00000507497 754 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC020978.7-201ENST00000575953 1187 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 RN7SL753P-201ENST00000581238 290 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC095055.1-201ENST00000603472 1113 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC087783.2-201ENST00000605070 562 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC012414.7-202ENST00000622705 1090 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC015804.1-201ENST00000622935 435 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AC015660.5-201ENST00000623238 564 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 AL359922.3-201ENST00000624779 1670 ntBASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM49D1C9J1S8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
TRIM49D1C9J1S8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 SNORA17.1-201ENST00000362945 126 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RNU1-83P-201ENST00000363426 164 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 DUTP5-201ENST00000406790 469 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP178-201ENST00000410380 128 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RN7SKP59-201ENST00000410520 314 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RN7SKP206-201ENST00000410823 293 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 CHEK2P5-201ENST00000423877 246 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AL161722.1-201ENST00000446972 1032 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 OTX2P1-201ENST00000450956 354 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 OR2AF1P-201ENST00000454899 889 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RN7SL174P-201ENST00000475578 289 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RPS4XP1-201ENST00000482189 787 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RPS21P4-201ENST00000487122 248 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AP002373.2-201ENST00000541631 1060 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 SNORD95-201ENST00000579879 68 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC107993.1-201ENST00000591343 684 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC011445.2-201ENST00000599274 173 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC005377.1-201ENST00000605126 456 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 AC019206.1-201ENST00000621938 425 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 MIR4302-201ENST00000638058 60 ntBASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TRIM49D1C9J1S8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL357515.1-201ENST00000402967 542 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL136116.2-201ENST00000404020 785 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL355994.1-201ENST00000424379 260 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC004938.1-201ENST00000438468 308 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 KNOP1P3-201ENST00000446933 426 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC092647.2-201ENST00000452998 253 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 RPSAP39-201ENST00000467439 883 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 AC106872.4-201ENST00000510050 523 ntBASIC4.89□□□□□ -1.63
TRIM49D1C9J1S8 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms