Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RNA5SP183-201ENST00000362452 119 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC234772.1-201ENST00000377927 937 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 MTND4P13-201ENST00000402078 1023 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AP002530.1-201ENST00000405705 684 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RNA5SP487-201ENST00000410186 122 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL390774.1-201ENST00000411924 246 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 OR51B3P-201ENST00000412287 913 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 MTATP6P20-201ENST00000414147 562 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 UBE2V1P9-201ENST00000414760 368 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC115285.1-201ENST00000424879 736 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL12P28-201ENST00000430852 489 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC007563.3-201ENST00000433233 371 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 MRPS21P3-201ENST00000436696 262 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 DNAJB5P1-201ENST00000454004 806 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC079168.1-201ENST00000458741 345 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RN7SL717P-201ENST00000478343 297 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL7P6-201ENST00000480903 738 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RPL7P41-201ENST00000485823 957 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 HMGB1P38-201ENST00000490557 577 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 RN7SL547P-201ENST00000490793 290 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC112673.1-201ENST00000513168 575 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 EIF3KP3-201ENST00000514461 639 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 DUXAP3-201ENST00000603616 594 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC008814.1-201ENST00000603797 406 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL589674.2-201ENST00000604304 337 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC011626.1-201ENST00000604710 562 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AP002802.2-201ENST00000605877 235 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC012213.4-201ENST00000606457 354 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AL157392.4-201ENST00000609756 345 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC079395.3-201ENST00000615161 484 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 OR5AC4P-202ENST00000642086 985 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 KARSP1-201ENST00000451871 1752 ntBASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.59□□□□□ -1.51
TCRBV5S1A1TA0A578 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
TCRBV5S1A1TA0A578 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
TCRBV5S1A1TA0A578 AC020656.2-201ENST00000613291 5309 ntBASIC5.59□□□□□ -1.52
TCRBV5S1A1TA0A578 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AC137056.2-201ENST00000624055 1958 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 CASC19-248ENST00000641674 1356 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AP002512.4-202ENST00000641599 4530 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AC005294.1-201ENST00000355509 281 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 RNA5SP132-201ENST00000364725 118 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 RNU6-468P-201ENST00000384003 109 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 SNORA11.5-201ENST00000408163 128 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 TATDN1P1-201ENST00000414123 891 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 CYCSP12-201ENST00000437729 300 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AL627224.1-201ENST00000448334 444 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 PRPF38AP1-201ENST00000451976 933 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 OR52E3P-201ENST00000452083 936 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 RPL7P45-201ENST00000455851 743 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 TPT1P1-201ENST00000458495 518 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 RN7SL51P-201ENST00000468230 285 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AC020779.1-201ENST00000478757 796 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 RN7SL184P-201ENST00000488308 297 ntBASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.58□□□□□ -1.52
TCRBV5S1A1TA0A578 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms