Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC092747.4-201ENST00000620519 1861 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AP001002.1-201ENST00000625148 1513 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC110792.3-201ENST00000595906 1614 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RANP4-201ENST00000413361 655 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC013429.2-201ENST00000418798 781 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL139148.1-201ENST00000427122 680 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC012075.1-201ENST00000436549 580 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC064862.4-201ENST00000442180 334 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 MRPL35P2-201ENST00000448009 511 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL627224.1-201ENST00000448334 444 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC020779.1-201ENST00000478757 796 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC091544.1-201ENST00000484702 348 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC024405.1-201ENST00000532521 1042 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC127381.1-201ENST00000555979 939 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 FAM106CP-201ENST00000582212 507 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 BMS1P7-201ENST00000602440 1052 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC010245.2-201ENST00000606908 1167 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC244100.4-201ENST00000617747 388 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC015914.2-201ENST00000618167 288 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL359742.1-201ENST00000622497 540 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC011447.7-201ENST00000624228 1590 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC132825.1-201ENST00000463573 2247 ntBASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRBV4-1A0A0J9YWV2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.71□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC093849.1-201ENST00000563631 2209 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 U3.3-201ENST00000362986 216 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNA5SP105-201ENST00000391123 113 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC013442.1-201ENST00000397347 228 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 Z86062.1-201ENST00000406773 777 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR2AH1P-201ENST00000425717 928 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPS29P10-201ENST00000439197 166 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL356981.1-201ENST00000454879 684 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CABYRP1-201ENST00000465493 1045 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPL35AP19-201ENST00000469425 329 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC093663.2-201ENST00000484625 313 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR11I1P-201ENST00000486033 954 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RPEP1-201ENST00000504507 658 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms