Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 CDC27P2-201ENST00000425026 1922 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC097461.1-201ENST00000568928 2821 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AL022322.2-201ENST00000624072 20397 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 SNORA51.1-201ENST00000363243 140 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNU1-43P-201ENST00000365052 165 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNA5SP223-201ENST00000365174 120 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RPL35AP24-201ENST00000413846 330 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 OR11I1P-201ENST00000486033 954 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 SNRPCP2-201ENST00000504370 475 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AL451049.1-201ENST00000608672 497 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 AC126915.2-201ENST00000610957 190 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 MIR6886-201ENST00000619864 61 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 UGT2B26P-201ENST00000508672 1613 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 DDX18P4-201ENST00000511690 1966 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 PANDAR-201ENST00000629595 1506 ntBASIC4.67□□□□□ -1.66
TRAPPC4Q9Y296 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 MUC2-202ENST00000613187 4845 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 U3.2-201ENST00000362981 210 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 RNU6-167P-201ENST00000384292 106 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC244033.1-201ENST00000426826 870 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 VN1R96P-201ENST00000446052 858 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AL389915.2-201ENST00000454576 441 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 OR2AF1P-201ENST00000454899 889 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC079841.1-201ENST00000481228 950 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC011411.1-201ENST00000509592 876 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 TCP11X3P-202ENST00000514289 1254 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 RPL23AP53-201ENST00000521854 457 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC022616.2-201ENST00000523185 300 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 OR4A46P-201ENST00000527255 933 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 RN7SL753P-201ENST00000581238 290 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms