Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MACF1Q9UPN3 BTBD10P1-201ENST00000549824 1352 ntBASIC1.98□□□□□ -2.09
MACF1Q9UPN3 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC006210.2-201ENST00000367074 1545 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 RNA5SP126-201ENST00000365092 109 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 RPL12P39-201ENST00000455456 496 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 RN7SL188P-201ENST00000469842 285 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC017015.1-201ENST00000477387 286 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC105129.1-201ENST00000560250 297 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 RN7SL802P-201ENST00000577858 299 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 BNIP3P35-201ENST00000604530 490 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 SNORA5A-201ENST00000384111 134 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL121977.1-201ENST00000401636 979 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL022237.1-201ENST00000446663 358 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 GMCL1P2-201ENST00000605230 823 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC006499.5-201ENST00000505037 514 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PMS2P3-207ENST00000529061 717 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL163952.1-202ENST00000569625 600 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC004890.3-201ENST00000605566 1095 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC012409.3-201ENST00000611343 981 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 NANOGP10-201ENST00000453325 895 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 RN7SL189P-201ENST00000468631 289 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC090515.3-201ENST00000560431 315 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC008814.1-201ENST00000603797 406 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ACTR3BP2-202ENST00000623630 1338 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AP002364.1-201ENST00000623330 3386 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AL021331.1-201ENST00000402817 582 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 TCEA1P1-201ENST00000449716 880 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ATP5F1P5-201ENST00000526403 760 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC005412.1-201ENST00000580812 1049 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC009313.2-201ENST00000417893 1941 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 ZNF840P-201ENST00000504759 1996 ntBASIC1.97□□□□□ -2.09
MACF1Q9UPN3 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC1.97□□□□□ -2.09
MACF1Q9UPN3 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms