Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC009852.2-201ENST00000567898 485 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AGGF1P5-201ENST00000567900 919 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MIR4509-3-201ENST00000578671 94 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AP005119.1-201ENST00000580956 292 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MIR4509-2-201ENST00000583920 94 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC010503.3-201ENST00000594355 540 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC025857.2-201ENST00000602711 238 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC098935.2-201ENST00000604222 466 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MIR4509-1-201ENST00000618224 94 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL035661.1-201ENST00000620459 1144 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL356863.1-201ENST00000623378 1080 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC006927.2-201ENST00000639256 389 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MIR193BHG-214ENST00000641765 509 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 CDC27P2-201ENST00000425026 1922 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 SPATA2P1-201ENST00000431223 2055 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 SEPT7P7-201ENST00000420492 1301 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC117409.1-201ENST00000470499 1310 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC104964.3-201ENST00000606115 2860 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 U3.7-201ENST00000363668 216 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 U3.10-201ENST00000364459 214 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 RNU6-298P-201ENST00000390888 96 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC007394.1-201ENST00000421941 531 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 NANOGP4-201ENST00000427230 913 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AL353898.1-201ENST00000444055 238 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 RPL12P39-201ENST00000455456 496 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 RN7SL466P-201ENST00000497546 295 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 SNORA70.20-201ENST00000516848 126 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 OR8G5-201ENST00000524943 1041 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC139103.1-201ENST00000534696 1030 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 OR7A19P-201ENST00000608051 733 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 VN1R9P-201ENST00000614184 867 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AP005431.1-201ENST00000618479 319 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 PSG10P-201ENST00000501199 1500 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 AC004076.2-201ENST00000620532 3323 ntBASIC5.57□□□□□ -1.52
VPS4AQ9UN37 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4AQ9UN37 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 RNU5B-4P-201ENST00000363508 111 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 SNORA5.1-201ENST00000384275 131 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 SNORA70-201ENST00000384436 135 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 SPTLC1P2-201ENST00000407089 121 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VPS4AQ9UN37 RNU4-74P-201ENST00000411280 161 ntBASIC5.56□□□□□ -1.52
VPS4AQ9UN37 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms