Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC007618.1-201ENST00000366455 732 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 MT-TP-201ENST00000387461 68 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AL358178.1-201ENST00000407698 397 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 RN7SKP206-201ENST00000410823 293 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AL390774.1-201ENST00000411924 246 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC009302.1-201ENST00000417147 390 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AL121878.1-201ENST00000418638 859 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 FAM96AP1-201ENST00000430879 482 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 Z85994.2-201ENST00000434327 452 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC104629.2-201ENST00000468627 598 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 CBX1P5-201ENST00000475330 559 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 SIAH1P1-201ENST00000479411 923 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC058823.1-201ENST00000485315 474 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC093890.1-201ENST00000502554 540 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC106730.2-201ENST00000566641 540 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 BMS1P7-201ENST00000602440 1052 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.82□□□□□ -1.64
CHRNA9Q9UGM1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC022417.1-201ENST00000624768 1303 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 OR9K1P-201ENST00000326513 941 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 MIR105-1-201ENST00000385222 81 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 OR4K12P-201ENST00000406538 961 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 RN7SKP59-201ENST00000410520 314 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 HMGN2P27-201ENST00000427352 270 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 UBE2V2P3-201ENST00000433562 437 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 RAD1P2-201ENST00000446414 663 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC020779.1-201ENST00000478757 796 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC126177.5-201ENST00000549599 178 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 RPL10P14-201ENST00000565265 298 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 MIR6837-201ENST00000620884 64 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 BX005019.1-201ENST00000561881 1810 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 AL034549.2-201ENST00000618285 3373 ntBASIC4.81□□□□□ -1.64
CHRNA9Q9UGM1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 RN7SKP160-201ENST00000363804 340 ntBASIC4.8□□□□□ -1.64
CHRNA9Q9UGM1 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms