Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC118658.2-201ENST00000618697 459 ntBASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL20A1Q9P218 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 MTND5P11-201ENST00000511037 1812 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 RNU1-146P-201ENST00000364015 165 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 SNORA74A-201ENST00000364089 198 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AL672167.2-201ENST00000377164 879 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AL355615.1-201ENST00000406187 641 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 RNU2-17P-201ENST00000410290 190 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC093084.1-201ENST00000424233 687 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC093655.2-201ENST00000425735 631 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 RPL12P17-201ENST00000432393 498 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 TPT1P3-201ENST00000492841 512 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC091912.1-201ENST00000511351 248 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 YWHABP2-201ENST00000540201 713 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 HMGN2P6-201ENST00000551091 273 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC084759.1-201ENST00000561168 290 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC068020.1-201ENST00000594215 661 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC130352.1-201ENST00000602979 661 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC019131.2-201ENST00000609071 870 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 RNU6-1192P-201ENST00000612197 107 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC078880.5-201ENST00000617845 421 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 RNU6-489P-201ENST00000618289 107 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC090506.2-201ENST00000624521 419 ntBASIC6.11□□□□□ -1.43
COL20A1Q9P218 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL20A1Q9P218 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL20A1Q9P218 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AL645568.2-201ENST00000432815 1337 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC008432.1-201ENST00000615912 1320 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC106883.1-201ENST00000418805 562 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC114973.1-201ENST00000429057 632 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 RN7SL329P-201ENST00000467740 299 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 RN7SL188P-201ENST00000469842 285 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 RPS17P11-201ENST00000474297 293 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 SNRPCP2-201ENST00000504370 475 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC110775.1-201ENST00000513721 462 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 SCARNA20.4-201ENST00000516969 131 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC010476.1-201ENST00000519111 851 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AL121594.4-201ENST00000556211 1196 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 AP001357.1-201ENST00000586304 1053 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.1□□□□□ -1.43
COL20A1Q9P218 BNIP3P32-201ENST00000600015 554 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 SUMO2P14-201ENST00000604488 293 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 TAS2R6P-201ENST00000605022 826 ntBASIC6.1□□□□□ -1.43
COL20A1Q9P218 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms