Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BX842559.2-201ENST00000451418 605 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL133445.1-201ENST00000467051 452 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 RPEP1-201ENST00000504507 658 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC027281.1-201ENST00000574178 758 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC008814.1-201ENST00000603797 406 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 SAMMSON-227ENST00000642114 1199 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AC114947.2-201ENST00000565748 2125 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 AL592494.2-201ENST00000425455 1548 ntBASIC5.42□□□□□ -1.54
PCDH9Q9HC56 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PCDH9Q9HC56 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 RN7SKP269-201ENST00000365545 319 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 RNA5SP339-201ENST00000390987 122 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 OR4K12P-201ENST00000406538 961 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 RN7SKP16-201ENST00000410180 299 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 MTND2P15-201ENST00000418575 892 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 RNF19BPX-201ENST00000426224 625 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 HSFY7P-201ENST00000432672 318 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 CLUHP1-201ENST00000435012 1190 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 HSFY8P-201ENST00000437934 318 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 GXYLT1P1-201ENST00000446657 490 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 HSFY5P-201ENST00000453726 309 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 MTND2P30-201ENST00000456663 382 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC015908.1-201ENST00000478739 476 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 NIFKP7-201ENST00000503365 834 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC106806.2-201ENST00000509365 500 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 ATP5LP3-201ENST00000514223 304 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC006427.1-201ENST00000514359 712 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 SEC11B-201ENST00000518383 499 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 IGKV2-18-201ENST00000522607 343 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC126177.5-201ENST00000549599 178 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC074029.2-201ENST00000551045 634 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 MIR6862-1-201ENST00000613016 70 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 MIR6862-2-201ENST00000614755 70 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC015660.5-201ENST00000623238 564 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC138965.3-201ENST00000623875 498 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC112198.2-201ENST00000426589 6996 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 AC087565.3-202ENST00000642085 1603 ntBASIC5.41□□□□□ -1.54
PCDH9Q9HC56 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH9Q9HC56 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AC005005.4-201ENST00000623789 16698 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL450345.1-202ENST00000605741 3881 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
PCDH9Q9HC56 RN7SKP162-201ENST00000363605 345 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 RNU1-146P-201ENST00000364015 165 ntBASIC5.4□□□□□ -1.54
PCDH9Q9HC56 AL353625.1-202ENST00000366273 571 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms