Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC006363.1-201ENST00000603806 463 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AL139124.1-201ENST00000609123 421 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 AC107075.1-201ENST00000613695 314 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 Six3os1_2.1-201ENST00000616963 217 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 STMN1P1-201ENST00000617809 440 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AL445670.1-201ENST00000618889 801 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 AL035661.1-201ENST00000620459 1144 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC026124.2-201ENST00000621847 656 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC024595.1-201ENST00000623088 387 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.9□□□□□ -1.79
LITAFQ99732 SMG1P5-202ENST00000529428 4219 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 SMG1P2-201ENST00000566127 4221 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 AL390862.1-201ENST00000635467 1469 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.9□□□□□ -1.79
LITAFQ99732 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.9□□□□□ -1.79
LITAFQ99732 AC015689.2-201ENST00000528172 1738 ntBASIC3.9□□□□□ -1.79
LITAFQ99732 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LITAFQ99732 OFD1P15Y-201ENST00000411536 1392 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.89□□□□□ -1.79
LITAFQ99732 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC3.89□□□□□ -1.79
LITAFQ99732 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.89□□□□□ -1.79
LITAFQ99732 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LITAFQ99732 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LITAFQ99732 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LITAFQ99732 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LITAFQ99732 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 RNU6-666P-201ENST00000363499 107 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 snoZ40.1-201ENST00000364540 72 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 RN7SKP191-201ENST00000364713 306 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LITAFQ99732 MIR128-2-201ENST00000384893 84 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 MIR188-201ENST00000385034 86 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 U3.28-201ENST00000391249 210 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 OR7E156P-201ENST00000400303 464 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 RSL24D1P4-201ENST00000400938 484 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 HIST1H2BPS2-201ENST00000402707 340 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 RPSAP44-201ENST00000406712 884 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 SOD1P1-201ENST00000407803 440 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 RN7SKP221-201ENST00000410420 301 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC3.89□□□□□ -1.79
LITAFQ99732 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 RPL21P50-201ENST00000417698 477 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 MTND4P20-201ENST00000424125 869 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC099677.3-201ENST00000427081 395 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 KRT18P53-201ENST00000431919 117 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 UBE2D3P4-201ENST00000441973 436 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC118469.1-201ENST00000442943 488 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 ARL5AP2-201ENST00000444698 533 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 MTND2P4-201ENST00000445034 1004 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.89□□□□□ -1.79
LITAFQ99732 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.89□□□□□ -1.79
LITAFQ99732 AC073387.1-201ENST00000453261 709 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 AC104164.1-201ENST00000460282 590 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 ABCC13-202ENST00000463099 3842 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC021205.1-201ENST00000468797 348 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 RPL35AP19-201ENST00000469425 329 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC091959.2-201ENST00000477363 321 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LITAFQ99732 AC069304.1-201ENST00000491593 704 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.89□□□□□ -1.79
LITAFQ99732 OR5H4P-201ENST00000510851 923 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC3.89□□□□□ -1.79
LITAFQ99732 KHDC1P1-201ENST00000511053 508 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 OR5H7P-201ENST00000514084 930 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC117532.1-201ENST00000514638 323 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 RNA5SP434-201ENST00000516647 121 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
LITAFQ99732 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.89□□□□□ -1.79
LITAFQ99732 AC137627.1-201ENST00000545761 289 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 AC010198.2-201ENST00000550612 259 ntBASIC3.89□□□□□ -1.79
LITAFQ99732 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC3.89□□□□□ -1.79
LITAFQ99732 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC3.89□□□□□ -1.79
LITAFQ99732 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LITAFQ99732 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms