Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 OR2M1P-201ENST00000318104 951 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 Y_RNA.18-201ENST00000362461 102 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 Y_RNA.248-201ENST00000364501 109 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SNORA64.3-201ENST00000365647 134 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SNORD65.1-201ENST00000390889 71 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC245036.1-201ENST00000391727 309 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 VIM2P-201ENST00000402383 1294 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RN7SKP146-201ENST00000410242 334 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RN7SKP221-201ENST00000410420 301 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RNU2-66P-201ENST00000410650 161 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RN7SKP33-201ENST00000410942 340 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC092745.2-202ENST00000411880 369 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL713922.1-201ENST00000416477 747 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 FAM183DP-201ENST00000421987 399 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RPS27AP7-201ENST00000422792 455 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC013403.1-201ENST00000436954 263 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC234771.2-201ENST00000445718 597 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC093166.3-201ENST00000448785 303 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL591363.1-201ENST00000450091 483 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL139156.3-201ENST00000454802 394 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 PSMC1P13-201ENST00000458195 985 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RPS7P10-201ENST00000464254 603 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 NDUFA5P5-201ENST00000468361 342 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC138853.1-201ENST00000503549 823 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 MTND2P33-201ENST00000506452 1031 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 RPL37P25-201ENST00000507308 276 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 ATP1B1P1-201ENST00000509767 915 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 SCARNA5-201ENST00000516201 276 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AP001207.1-201ENST00000524051 481 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 OR4C2P-201ENST00000530855 1064 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AL359704.2-201ENST00000604335 521 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 U6.107-201ENST00000637108 79 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 AC099063.3-201ENST00000642066 185 ntBASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTCHD1Q96NR3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 AC109315.1-201ENST00000584143 1347 ntBASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 AC092111.2-201ENST00000611627 1414 ntBASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCHD1Q96NR3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC062029.1-202ENST00000606164 3651 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 RNY3P10-201ENST00000384764 102 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 RPL5P20-201ENST00000403848 896 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL133260.1-201ENST00000405720 405 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC004448.2-201ENST00000422360 586 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC104651.1-201ENST00000427559 735 ntBASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCHD1Q96NR3 AL596276.1-201ENST00000434465 418 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms