Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS50Q96JG6 AC133552.1-201ENST00000569988 4007 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 AL606537.1-201ENST00000607258 2011 ntBASIC5.64□□□□□ -1.51
VPS50Q96JG6 RLIMP2-201ENST00000427891 1563 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 KARSP1-201ENST00000451871 1752 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 OR10R3P-201ENST00000361688 942 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 ANAPC10P1-201ENST00000395991 556 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 SNRPEP6-201ENST00000407465 277 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 MIR1203-201ENST00000408812 85 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 RN7SKP166-201ENST00000410812 305 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 XKRYP4-201ENST00000414395 483 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 VPS26BP1-201ENST00000417155 755 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AK4P4-201ENST00000419465 646 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 NDUFA5P10-201ENST00000432147 357 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC242426.1-201ENST00000435270 960 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 XKRYP5-201ENST00000449659 483 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 MTND2P8-201ENST00000450555 1025 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 RSU1P1-201ENST00000453416 441 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 SETP20-201ENST00000457046 852 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC069304.1-201ENST00000491593 704 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 RN7SL193P-201ENST00000491708 276 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC021146.5-201ENST00000503544 545 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 GLUD1P3-202ENST00000508551 200 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 RNA5SP438-201ENST00000516561 112 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC091163.3-201ENST00000518269 1144 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 EEF1A1P37-201ENST00000522748 715 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 PCNAP4-201ENST00000532690 730 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 LSM3P2-201ENST00000551246 273 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC011445.2-201ENST00000599274 173 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL160237.3-201ENST00000604114 1013 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC245100.7-201ENST00000609678 442 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 AL136228.1-201ENST00000622221 319 ntBASIC5.63□□□□□ -1.51
VPS50Q96JG6 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS50Q96JG6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS50Q96JG6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC011933.2-201ENST00000578539 2790 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 THAP12P9-201ENST00000503971 2360 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 OR52B3P-201ENST00000314715 928 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 RNA5SP273-201ENST00000362484 113 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 RN7SKP78-201ENST00000364711 318 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 RNU6-1263P-201ENST00000384601 106 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AL031985.1-201ENST00000392713 418 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AP002530.1-201ENST00000405705 684 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 GTF2IP5-201ENST00000414608 731 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC104843.2-201ENST00000427666 297 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 AC092447.2-201ENST00000435487 669 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS50Q96JG6 BMS1P10-201ENST00000443754 1120 ntBASIC5.62□□□□□ -1.51
VPS50Q96JG6 RPS27P5-201ENST00000444247 244 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms