Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC004076.2-201ENST00000620532 3323 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RAD17P1-201ENST00000418130 2042 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AP005435.3-201ENST00000531260 3198 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CEACAMP6-201ENST00000452007 574 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 BNIP3P35-201ENST00000604530 490 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 MIR6853-201ENST00000619642 74 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 MIR133A2-201ENST00000347538 102 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 MIR659-201ENST00000384963 97 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AK3P4-201ENST00000504283 583 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC097486.1-201ENST00000515331 210 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC099676.1-201ENST00000608886 657 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AL049536.1-201ENST00000625043 744 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AP005432.1-201ENST00000580891 3485 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 UG0898H09-202ENST00000623646 7040 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RNA5SP509-201ENST00000364577 119 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL136116.2-201ENST00000404020 785 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 HYALP1-201ENST00000417674 1279 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC006946.1-201ENST00000429106 328 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RPL19P16-201ENST00000433839 588 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RPL7P41-201ENST00000485823 957 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC010487.1-201ENST00000594408 1172 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC245389.1-201ENST00000605141 529 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 STX3-208ENST00000641815 3236 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RNU6-316P-201ENST00000391027 107 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 ATP5HP3-201ENST00000396994 486 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 PEX12P1-201ENST00000400284 1048 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RN7SL443P-201ENST00000464331 290 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 snoU109.5-201ENST00000516231 132 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 SNORA31.9-201ENST00000516429 84 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL445567.2-201ENST00000618935 498 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL121657.1-201ENST00000327215 531 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 TXNP2-201ENST00000443918 295 ntBASIC3.32□□□□□ -1.88
ALMS1Q8TCU4 RPL6P5-201ENST00000445678 828 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms