Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FAR2P1-206ENST00000449736 709 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AL591363.1-201ENST00000450091 483 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 HMGB1P4-201ENST00000455362 567 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC093890.1-201ENST00000502554 540 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC012339.2-201ENST00000523996 453 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 EIF4A2P5-201ENST00000529914 499 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC068993.1-201ENST00000546724 589 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AC084759.1-201ENST00000561168 290 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AP005262.1-201ENST00000582646 997 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.16□□□□□ -1.58
CDKL3Q8IVW4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.15□□□□□ -1.58
CDKL3Q8IVW4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 SNORA70.10-201ENST00000384515 134 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 ATP5HP3-201ENST00000396994 486 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 MIR1286-201ENST00000408112 78 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 NANOGP4-201ENST00000427230 913 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AC245047.2-201ENST00000441060 530 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 KNOP1P3-201ENST00000446933 426 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 UBA52P7-201ENST00000486088 380 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 RN7SL101P-201ENST00000496350 279 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 RPS27AP18-201ENST00000515536 459 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AC027308.1-201ENST00000517993 110 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 LSM3P2-201ENST00000551246 273 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AL049830.4-201ENST00000555149 351 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 SETP1-201ENST00000556014 845 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AF117829.2-201ENST00000619538 361 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 MIR4302-201ENST00000638058 60 ntBASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDKL3Q8IVW4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 RNU4-44P-201ENST00000363050 141 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 SNORA66-201ENST00000384792 133 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AC007068.1-201ENST00000396690 844 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 UBE2V2P4-201ENST00000447495 259 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 IGHV5-78-201ENST00000450948 295 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AL606490.1-201ENST00000452266 765 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AL389915.2-201ENST00000454576 441 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 RPS17P2-201ENST00000461663 408 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 RN7SL799P-201ENST00000475891 298 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 HMGB3P16-201ENST00000508037 287 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 ATP5LP3-201ENST00000514223 304 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 ENPP7P9-201ENST00000514456 627 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 OR8A2P-201ENST00000528631 952 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AP000864.1-201ENST00000609424 650 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 AP001005.3-201ENST00000622049 129 ntBASIC5.14□□□□□ -1.59
CDKL3Q8IVW4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms