Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
WDR88Q6ZMY6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC007382.1-201ENST00000624376 2618 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 ZNF733P-202ENST00000444809 1573 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 RNU1-19P-201ENST00000363306 165 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC007618.1-201ENST00000366455 732 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 Z93019.1-201ENST00000416450 973 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC012075.1-201ENST00000436549 580 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 MTCYBP12-201ENST00000440559 1134 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 TCEA1P3-201ENST00000443005 880 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC104634.1-201ENST00000452720 462 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 YWHAEP1-201ENST00000453697 763 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 EIF3LP3-201ENST00000495197 822 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC090638.1-201ENST00000498296 909 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC108157.1-201ENST00000510511 539 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC108120.2-201ENST00000512973 294 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC027544.3-201ENST00000535082 757 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 BLZF2P-201ENST00000553776 1130 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC020978.7-201ENST00000575953 1187 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC005229.3-201ENST00000603438 323 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC011626.1-201ENST00000604710 562 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC096553.1-201ENST00000605169 829 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC126175.1-201ENST00000617041 758 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 AC020763.5-201ENST00000623298 430 ntBASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
WDR88Q6ZMY6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 AC011755.1-201ENST00000623763 2049 ntBASIC4.84□□□□□ -1.64
WDR88Q6ZMY6 AL445437.1-201ENST00000623157 3087 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 AC073136.1-201ENST00000449426 2884 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 SOCS5P3-201ENST00000425115 1576 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 CASC19-248ENST00000641674 1356 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 AC022417.1-201ENST00000624768 1303 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 VDAC2P1-201ENST00000399358 958 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 RN7SKP286-201ENST00000410894 299 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 COX5BP7-201ENST00000414780 274 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 PCNPP4-201ENST00000414817 517 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 AC245517.2-201ENST00000442890 346 ntBASIC4.83□□□□□ -1.64
WDR88Q6ZMY6 GAPDHP25-201ENST00000447061 1001 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms