Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC009229.4-201ENST00000623854 1947 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RNU6-40P-201ENST00000384254 107 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RNU6-178P-201ENST00000384631 104 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL121878.1-201ENST00000418638 859 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL161636.2-201ENST00000445179 927 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 SUMO2P1-206ENST00000445436 284 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL591623.2-201ENST00000449978 222 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL591363.1-201ENST00000450091 483 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RPL21P6-201ENST00000479171 504 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 COL6A4P2-205ENST00000509855 506 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 SETP12-201ENST00000514068 805 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RN7SKP141-201ENST00000516167 338 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 OR8G3P-201ENST00000533406 921 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC008083.2-201ENST00000546707 476 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL512310.9-201ENST00000553311 948 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 RBM22P12-201ENST00000567098 1255 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 VN1R84P-201ENST00000593697 235 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 SUMO2P14-201ENST00000604488 293 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AL391834.1-201ENST00000609609 560 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 uc_338.7-201ENST00000621834 124 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 MTND4P21-201ENST00000453886 1357 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AC107027.3-201ENST00000565095 3473 ntBASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NHLRC1Q6VVB1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AL034549.2-201ENST00000618285 3373 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 RNA5SP234-201ENST00000363916 119 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 RNU4-2-201ENST00000365668 141 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 RN7SKP293-201ENST00000411389 296 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 RPL6P29-201ENST00000414863 865 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 TNPO1P1-201ENST00000423641 1138 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 SRSF1P1-201ENST00000424058 520 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 MTCO3P21-201ENST00000430791 643 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC012075.1-201ENST00000436549 580 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 RPL34P26-201ENST00000445636 354 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC090804.1-201ENST00000448870 490 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 HMGB1P26-201ENST00000452520 628 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 RANP1-206ENST00000455094 651 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC007688.1-201ENST00000475592 759 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 HIGD1AP18-201ENST00000520730 278 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 NOP56P3-201ENST00000549457 385 ntBASIC4.85□□□□□ -1.63
NHLRC1Q6VVB1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms