Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MTND3P24-201ENST00000506306 329 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 MTCO1P31-201ENST00000506355 492 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC027176.2-201ENST00000559166 746 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC005242.1-201ENST00000585658 438 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC068870.1-201ENST00000563737 2455 ntBASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.71□□□□□ -1.5
SNX30Q5VWJ9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC005294.1-201ENST00000355509 281 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 SNORA16A-201ENST00000384342 137 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 RPL5P19-201ENST00000404228 893 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 OR52B5P-201ENST00000435337 951 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 CNOT7P2-201ENST00000441051 832 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 XKRY2-201ENST00000442362 1093 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC023512.1-201ENST00000444513 499 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AL035090.1-201ENST00000454835 332 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 SUMO1P1-201ENST00000497904 306 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC093763.2-201ENST00000505334 1223 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 MTND6P2-201ENST00000512226 524 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 SNORA26.10-201ENST00000516427 141 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 CDC42P3-201ENST00000518493 633 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC134349.2-201ENST00000535136 910 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 OR52B5P-202ENST00000641118 1110 ntBASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX30Q5VWJ9 AC068446.1-201ENST00000556425 1549 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AL590806.1-201ENST00000415818 853 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AL121878.1-201ENST00000418638 859 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 RPL7P56-201ENST00000429441 717 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AL513321.1-201ENST00000441175 761 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 LINC02210-201ENST00000444561 288 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 IGBP1P3-201ENST00000447449 1000 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 CBX1P2-201ENST00000453841 458 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 MTND2P30-201ENST00000456663 382 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 RN7SL172P-201ENST00000460535 303 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC020779.1-201ENST00000478757 796 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 RPL7P6-201ENST00000480903 738 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC021106.1-201ENST00000509020 1058 ntBASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX30Q5VWJ9 AC108120.2-201ENST00000512973 294 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms