Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AP001542.2-201ENST00000593141 364 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 VN1R84P-201ENST00000593697 235 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC063977.7-201ENST00000594454 337 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 VN1R88P-201ENST00000596787 292 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC113368.1-201ENST00000603736 382 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AL357094.1-201ENST00000603845 844 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC002487.1-201ENST00000604565 994 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 MIR6133-201ENST00000617057 108 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC139769.3-201ENST00000618383 175 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 VN1R7P-201ENST00000619242 903 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC017104.5-201ENST00000637647 639 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC006042.3-201ENST00000454684 1469 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC093775.1-201ENST00000624154 1868 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 SNORA70.6-201ENST00000383934 134 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AL133260.1-201ENST00000405720 405 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AL139805.1-201ENST00000407837 289 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 PCNPP4-201ENST00000414817 517 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 TRGV6-201ENST00000417928 299 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AL513175.2-201ENST00000422071 443 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 C1DP1-201ENST00000426049 402 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC245291.3-201ENST00000443400 292 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 RPS26P30-201ENST00000443431 335 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 RPL12P39-201ENST00000455456 496 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC004815.1-201ENST00000484185 331 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 PDCL3P4-201ENST00000489621 720 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC138517.1-201ENST00000515724 568 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC113191.1-201ENST00000517759 403 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 IGLVIV-64-201ENST00000518581 301 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 CASP1P2-201ENST00000526830 1258 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC027026.1-201ENST00000532323 742 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 YWHABP2-201ENST00000540201 713 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC126615.2-201ENST00000553003 515 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 CCDC58P1-201ENST00000578567 430 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 RNU4ATAC-201ENST00000580972 127 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AP001823.1-201ENST00000604056 1003 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC141002.1-201ENST00000607025 279 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC009237.15-201ENST00000610252 501 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 MIR6774-201ENST00000614651 70 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC011330.2-201ENST00000621680 635 ntBASIC5.65□□□□□ -1.5
RNF220Q5VTB9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RNF220Q5VTB9 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF220Q5VTB9 AC009962.1-201ENST00000567327 3813 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms