Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 RPS27AP6-201ENST00000427962 448 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MTCYBP21-201ENST00000443300 1113 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 ZNF619P1-201ENST00000446539 752 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC009220.1-201ENST00000451614 275 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC002553.3-201ENST00000453002 341 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 RPL35AP28-201ENST00000459730 331 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 OR2AO1P-201ENST00000476497 403 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC004453.1-201ENST00000487895 408 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 RN7SL193P-201ENST00000491708 276 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC021146.7-201ENST00000509604 775 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 IMPA1P1-201ENST00000510718 842 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MIR2117-201ENST00000516780 80 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC019227.1-201ENST00000526902 510 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 HAUS8P1-201ENST00000549005 542 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MTCO3P22-201ENST00000603219 784 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AL022394.1-201ENST00000606979 292 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AL049539.1-201ENST00000611964 459 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MIR6793-201ENST00000612376 63 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 uc_338.26-201ENST00000612659 160 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MIR1264-201ENST00000616374 69 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 RFPL4AP6-201ENST00000616792 846 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 HSPA8P14-201ENST00000552265 1805 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 AC005332.5-201ENST00000591222 2919 ntBASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDLIM3Q53GG5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AL603750.1-201ENST00000624216 1717 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RN7SKP185-201ENST00000362813 326 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RNU1-136P-201ENST00000384181 164 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AL355143.1-201ENST00000407101 841 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RN7SKP59-201ENST00000410520 314 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 FAR2P2-201ENST00000413041 594 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 MTCO2P1-201ENST00000424648 477 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 FAR2P4-202ENST00000425399 584 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CFL1P1-202ENST00000432948 411 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC046176.1-201ENST00000435260 1170 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 SCAND3P1-201ENST00000439854 1060 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC005077.1-201ENST00000449226 375 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 FAR2P1-206ENST00000449736 709 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC243772.1-201ENST00000451620 410 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RN7SL197P-201ENST00000466981 299 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC023245.1-201ENST00000468501 517 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 RPL23AP73-201ENST00000492507 471 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC104629.1-201ENST00000494226 508 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC016550.1-201ENST00000505348 785 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC147055.3-201ENST00000510547 851 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 GAPDHP71-201ENST00000511530 1003 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 MTCO2P22-201ENST00000603246 681 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 IMMP1LP3-201ENST00000604197 224 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 HIRAP1-201ENST00000605318 787 ntBASIC4.72□□□□□ -1.65
PDLIM3Q53GG5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms