Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 GYG1P1-201ENST00000460864 698 ntBASIC6.05□□□□□ -1.44
RFX7Q2KHR2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 ENPP7P9-201ENST00000514456 627 ntBASIC6.05□□□□□ -1.44
RFX7Q2KHR2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 GSTP1P1-201ENST00000548078 319 ntBASIC6.05□□□□□ -1.44
RFX7Q2KHR2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX7Q2KHR2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC012618.3-205ENST00000637896 1496 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC073136.1-201ENST00000449426 2884 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC068446.1-201ENST00000556425 1549 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 RPL10P10-201ENST00000403509 664 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 RNA5SP113-201ENST00000410486 84 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC004074.1-201ENST00000421810 1063 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC007559.1-201ENST00000428736 355 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 BTF3P6-201ENST00000448054 499 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 RNA5SP392-201ENST00000516905 112 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 OR5D2P-201ENST00000524390 911 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC012557.1-201ENST00000607115 611 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC015914.2-201ENST00000618167 288 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC119674.1-217ENST00000641942 1086 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX7Q2KHR2 ECM1P2-201ENST00000503354 1577 ntBASIC6.04□□□□□ -1.44
RFX7Q2KHR2 AC004817.4-201ENST00000602396 3625 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 DHX9P1-201ENST00000436565 3076 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 AC017079.1-201ENST00000333650 415 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 MIR192-201ENST00000384915 110 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 AC013442.1-201ENST00000397347 228 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 HMGB3P7-201ENST00000400214 611 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 RBMY2TP-201ENST00000451162 947 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 RN7SL517P-201ENST00000462240 305 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 AC008897.1-201ENST00000494006 347 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 GAPDHP56-201ENST00000506031 988 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 AL133406.3-201ENST00000606817 541 ntBASIC6.03□□□□□ -1.44
RFX7Q2KHR2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX7Q2KHR2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC100778.3-201ENST00000580060 1750 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AL138878.2-201ENST00000440581 1241 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AL137845.2-201ENST00000444292 988 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC112498.1-201ENST00000444401 332 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC000111.2-201ENST00000448200 210 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC009220.1-201ENST00000451614 275 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AL356981.1-201ENST00000454879 684 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC063943.1-201ENST00000465434 453 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC096741.1-201ENST00000472250 846 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 NPM1P28-201ENST00000492269 840 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.02□□□□□ -1.45
RFX7Q2KHR2 AL049830.4-201ENST00000555149 351 ntBASIC6.02□□□□□ -1.45
RFX7Q2KHR2 MIR3667-201ENST00000581025 74 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms