Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 ECM1P2-201ENST00000503354 1577 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 AC068446.1-201ENST00000556425 1549 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXF1Q12946 AP005432.1-201ENST00000580891 3485 ntBASIC4.51□□□□□ -1.69
FOXF1Q12946 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXF1Q12946 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
FOXF1Q12946 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXF1Q12946 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.5□□□□□ -1.69
FOXF1Q12946 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXF1Q12946 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXF1Q12946 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 AL645927.1-201ENST00000396783 406 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 EI24P3-201ENST00000399046 1062 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 CHMP1B2P-201ENST00000399581 597 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AL021331.1-201ENST00000402817 582 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AP002530.1-201ENST00000405705 684 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXF1Q12946 AC073052.1-201ENST00000440417 714 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AL157385.1-201ENST00000446973 268 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 RPS17P2-201ENST00000461663 408 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 RN7SL319P-201ENST00000480656 221 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC140172.1-201ENST00000502928 141 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXF1Q12946 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 AC105031.1-201ENST00000518550 476 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.5□□□□□ -1.69
FOXF1Q12946 GTF2IP11-201ENST00000526931 420 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 OR8A2P-201ENST00000528631 952 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXF1Q12946 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXF1Q12946 AGGF1P9-201ENST00000561884 913 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXF1Q12946 MIR7155-201ENST00000615925 56 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 BX005214.3-202ENST00000619809 325 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 AC068870.2-201ENST00000620635 389 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
FOXF1Q12946 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 AL078595.2-201ENST00000605309 1780 ntBASIC4.5□□□□□ -1.69
FOXF1Q12946 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXF1Q12946 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
FOXF1Q12946 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXF1Q12946 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
FOXF1Q12946 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
FOXF1Q12946 RN7SKP95-201ENST00000362860 303 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC013442.1-201ENST00000397347 228 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AC007738.1-201ENST00000413892 348 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC104333.2-201ENST00000422630 192 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 HSPE1P16-201ENST00000426640 348 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXF1Q12946 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 SCAND3P1-201ENST00000439854 1060 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXF1Q12946 TRY2P-201ENST00000448860 689 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AC004453.1-201ENST00000487895 408 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXF1Q12946 MRPS33P2-201ENST00000507850 322 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXF1Q12946 ASNSP4-201ENST00000511103 447 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC027308.1-201ENST00000517993 110 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 MIR4472-2-201ENST00000582069 67 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC011840.5-201ENST00000582125 771 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AL049794.2-201ENST00000616301 365 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 AC087821.1-201ENST00000623639 567 ntBASIC4.49□□□□□ -1.69
FOXF1Q12946 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXF1Q12946 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXF1Q12946 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
FOXF1Q12946 AL731532.2-201ENST00000623542 1953 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms