Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LTBQ06643 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LTBQ06643 MRE11P1-201ENST00000464884 2127 ntBASIC5.09□□□□□ -1.59
LTBQ06643 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 AC012078.1-201ENST00000405035 1646 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.09□□□□□ -1.59
LTBQ06643 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 SNORA64.1-201ENST00000362600 132 ntBASIC5.09□□□□□ -1.59
LTBQ06643 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 SNORA5.1-201ENST00000384275 131 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.09□□□□□ -1.59
LTBQ06643 MIR1286-201ENST00000408112 78 ntBASIC5.09□□□□□ -1.59
LTBQ06643 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBQ06643 RPS6P23-201ENST00000413224 722 ntBASIC5.09□□□□□ -1.59
LTBQ06643 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 RNF10P1-201ENST00000418589 369 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AK4P4-201ENST00000419465 646 ntBASIC5.09□□□□□ -1.59
LTBQ06643 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 AC127526.2-201ENST00000426436 775 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC013262.1-201ENST00000426710 252 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 VDAC1P6-201ENST00000430062 855 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.09□□□□□ -1.59
LTBQ06643 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 AC069277.2-201ENST00000454211 432 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 AC010627.1-201ENST00000503819 1294 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC105420.1-201ENST00000504389 582 ntBASIC5.09□□□□□ -1.59
LTBQ06643 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBQ06643 PCNAP1-201ENST00000505363 709 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC005351.1-201ENST00000511152 786 ntBASIC5.09□□□□□ -1.59
LTBQ06643 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBQ06643 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBQ06643 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.09□□□□□ -1.59
LTBQ06643 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 OR8G5-201ENST00000524943 1041 ntBASIC5.09□□□□□ -1.59
LTBQ06643 NPM1P35-201ENST00000533043 868 ntBASIC5.09□□□□□ -1.59
LTBQ06643 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.09□□□□□ -1.59
LTBQ06643 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.09□□□□□ -1.59
LTBQ06643 AC004825.1-201ENST00000555068 586 ntBASIC5.09□□□□□ -1.59
LTBQ06643 MTCYBP27-201ENST00000555160 670 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBQ06643 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.09□□□□□ -1.59
LTBQ06643 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.09□□□□□ -1.59
LTBQ06643 AC015802.2-201ENST00000589690 189 ntBASIC5.09□□□□□ -1.59
LTBQ06643 VN1R81P-201ENST00000602085 372 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC018809.2-201ENST00000602436 3823 ntBASIC5.09□□□□□ -1.59
LTBQ06643 RPSAP73-201ENST00000614820 330 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC007786.3-201ENST00000615154 596 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC090607.5-201ENST00000615692 224 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC025016.1-201ENST00000616746 682 ntBASIC5.09□□□□□ -1.59
LTBQ06643 AC006386.1-201ENST00000619436 415 ntBASIC5.09□□□□□ -1.59
LTBQ06643 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 AP000676.4-201ENST00000624659 623 ntBASIC5.09□□□□□ -1.59
LTBQ06643 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.09□□□□□ -1.59
LTBQ06643 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LTBQ06643 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LTBQ06643 AC005005.4-201ENST00000623789 16698 ntBASIC5.09□□□□□ -1.6
LTBQ06643 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LTBQ06643 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.09□□□□□ -1.6
LTBQ06643 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LTBQ06643 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.09□□□□□ -1.6
LTBQ06643 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
LTBQ06643 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.08□□□□□ -1.6
LTBQ06643 NAMPTP1-201ENST00000440465 2514 ntBASIC5.08□□□□□ -1.6
LTBQ06643 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.08□□□□□ -1.6
LTBQ06643 AC012321.1-201ENST00000561622 1588 ntBASIC5.08□□□□□ -1.6
LTBQ06643 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 OR4F13P-202ENST00000560066 2054 ntBASIC5.08□□□□□ -1.6
LTBQ06643 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.08□□□□□ -1.6
LTBQ06643 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
LTBQ06643 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LTBQ06643 AL353625.1-202ENST00000366273 571 ntBASIC5.08□□□□□ -1.6
LTBQ06643 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LTBQ06643 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LTBQ06643 SNORA11-201ENST00000408789 128 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms