Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PRPF38AP1-201ENST00000451976 933 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AL691482.1-201ENST00000453255 87 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AL356390.1-201ENST00000455684 397 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.85□□□□□ -1.47
GABPAQ06546 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.85□□□□□ -1.47
GABPAQ06546 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.85□□□□□ -1.47
GABPAQ06546 BNIP3P1-201ENST00000547295 580 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AC008147.3-201ENST00000548666 354 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
GABPAQ06546 AL390726.5-202ENST00000564800 256 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
GABPAQ06546 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.85□□□□□ -1.47
GABPAQ06546 AC091042.1-201ENST00000579213 173 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AC018695.5-201ENST00000605872 315 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 MIR6780A-201ENST00000615089 68 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 AC026367.3-201ENST00000619032 590 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.85□□□□□ -1.47
GABPAQ06546 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GABPAQ06546 AC140134.1-201ENST00000511830 3544 ntBASIC5.85□□□□□ -1.47
GABPAQ06546 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
GABPAQ06546 SAMMSON-226ENST00000642089 1582 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.84□□□□□ -1.47
GABPAQ06546 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
GABPAQ06546 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
GABPAQ06546 AC007618.1-201ENST00000366455 732 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 RN7SKP16-201ENST00000410180 299 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.84□□□□□ -1.47
GABPAQ06546 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.84□□□□□ -1.47
GABPAQ06546 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.84□□□□□ -1.47
GABPAQ06546 AC091180.1-201ENST00000462104 372 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 AC105420.1-201ENST00000504389 582 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.84□□□□□ -1.47
GABPAQ06546 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.84□□□□□ -1.47
GABPAQ06546 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.84□□□□□ -1.47
GABPAQ06546 IGKV1-32-201ENST00000519290 311 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.84□□□□□ -1.47
GABPAQ06546 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.84□□□□□ -1.47
GABPAQ06546 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.84□□□□□ -1.47
GABPAQ06546 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.84□□□□□ -1.47
GABPAQ06546 CR381572.2-201ENST00000624852 397 ntBASIC5.84□□□□□ -1.47
GABPAQ06546 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
GABPAQ06546 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
GABPAQ06546 AL449283.1-201ENST00000602631 3403 ntBASIC5.84□□□□□ -1.48
GABPAQ06546 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
GABPAQ06546 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
GABPAQ06546 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
GABPAQ06546 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.83□□□□□ -1.48
GABPAQ06546 SYT14P1-202ENST00000600441 1448 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.83□□□□□ -1.48
GABPAQ06546 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
GABPAQ06546 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.83□□□□□ -1.48
GABPAQ06546 AC079741.1-201ENST00000321498 212 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.83□□□□□ -1.48
GABPAQ06546 COX5BP7-201ENST00000414780 274 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.83□□□□□ -1.48
GABPAQ06546 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.83□□□□□ -1.48
GABPAQ06546 SCAND3P1-201ENST00000439854 1060 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.83□□□□□ -1.48
GABPAQ06546 AC000111.2-201ENST00000448200 210 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 OR52E3P-201ENST00000452083 936 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.83□□□□□ -1.48
GABPAQ06546 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.83□□□□□ -1.48
GABPAQ06546 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.83□□□□□ -1.48
GABPAQ06546 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.83□□□□□ -1.48
GABPAQ06546 MIR4330-201ENST00000579077 105 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 MIR4270-201ENST00000581799 70 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 PRPF19P1-201ENST00000584766 898 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 AC087283.1-201ENST00000604029 1074 ntBASIC5.83□□□□□ -1.48
GABPAQ06546 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GABPAQ06546 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 TET1P1-201ENST00000426627 2301 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.82□□□□□ -1.48
GABPAQ06546 ZNF652P1-201ENST00000442420 1309 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GABPAQ06546 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GABPAQ06546 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GABPAQ06546 MIR192-201ENST00000384915 110 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms