Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 UBE2V1P6-201ENST00000430840 422 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 HMGB3P10-201ENST00000434734 572 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 CCRL1P1-201ENST00000449542 1053 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AL591623.2-201ENST00000449978 222 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC023141.9-201ENST00000458734 412 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC107015.1-201ENST00000466902 747 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 RPL35AP19-201ENST00000469425 329 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.67□□□□□ -1.5
HDAC4P56524 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.67□□□□□ -1.5
HDAC4P56524 RN7SL466P-201ENST00000497546 295 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC090638.1-201ENST00000498296 909 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC109464.1-201ENST00000511091 819 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 MTND6P2-201ENST00000512226 524 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 CKS1BP1-201ENST00000555221 240 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.67□□□□□ -1.5
HDAC4P56524 SNORD95-201ENST00000579879 68 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 MIR4660-201ENST00000583549 74 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.67□□□□□ -1.5
HDAC4P56524 AC000068.2-201ENST00000608816 460 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AL512624.1-201ENST00000613638 469 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 AL691477.1-201ENST00000624398 162 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.67□□□□□ -1.5
HDAC4P56524 TMEM30CP-203ENST00000637814 1035 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.67□□□□□ -1.5
HDAC4P56524 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HDAC4P56524 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HDAC4P56524 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 RNA5SP242-201ENST00000364171 118 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HDAC4P56524 SNORD65-201ENST00000391079 73 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 MIR937-201ENST00000401271 86 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 DBIP1-201ENST00000401435 260 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 GTF3AP1-201ENST00000416942 1004 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.66□□□□□ -1.5
HDAC4P56524 SRSF1P1-201ENST00000424058 520 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AL606490.7-201ENST00000433136 191 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 SUMO2P1-206ENST00000445436 284 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
HDAC4P56524 RN7SL717P-201ENST00000478343 297 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 RPSAP51-201ENST00000497462 645 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.66□□□□□ -1.5
HDAC4P56524 RFPL4AP5-201ENST00000514977 504 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 AP000859.1-201ENST00000525536 307 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.66□□□□□ -1.5
HDAC4P56524 AC016180.1-201ENST00000567945 403 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.66□□□□□ -1.5
HDAC4P56524 AC108738.1-201ENST00000603703 237 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC010245.2-201ENST00000606908 1167 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.66□□□□□ -1.5
HDAC4P56524 AC004241.3-201ENST00000611728 517 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC022467.1-201ENST00000614738 749 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 AC006249.1-201ENST00000621223 471 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 MIR6730-201ENST00000622213 67 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.66□□□□□ -1.5
HDAC4P56524 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.66□□□□□ -1.5
HDAC4P56524 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HDAC4P56524 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 AC083899.2-201ENST00000423285 1376 ntBASIC5.66□□□□□ -1.5
HDAC4P56524 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.66□□□□□ -1.5
HDAC4P56524 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
HDAC4P56524 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
HDAC4P56524 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HDAC4P56524 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HDAC4P56524 AC021242.1-201ENST00000507315 2035 ntBASIC5.65□□□□□ -1.5
HDAC4P56524 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HDAC4P56524 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.65□□□□□ -1.5
HDAC4P56524 MTCO1P15-201ENST00000529569 1526 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms