Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC242628.1-201ENST00000606810 391 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC004775.1-201ENST00000607389 753 ntBASIC4.94□□□□□ -1.62
CDH11P55287 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH11P55287 RMST_5.1-201ENST00000618704 126 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH11P55287 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 AC114786.1-201ENST00000512892 1415 ntBASIC4.94□□□□□ -1.62
CDH11P55287 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 MRE11P1-201ENST00000464884 2127 ntBASIC4.94□□□□□ -1.62
CDH11P55287 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH11P55287 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH11P55287 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH11P55287 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.93□□□□□ -1.62
CDH11P55287 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 RNU6-1251P-201ENST00000364502 107 ntBASIC4.93□□□□□ -1.62
CDH11P55287 RN7SKP124-201ENST00000364730 341 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC007618.1-201ENST00000366455 732 ntBASIC4.93□□□□□ -1.62
CDH11P55287 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH11P55287 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AL353692.2-201ENST00000407054 335 ntBASIC4.93□□□□□ -1.62
CDH11P55287 SETP15-201ENST00000412724 337 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 AC007161.1-204ENST00000423039 460 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AL034379.1-201ENST00000423216 253 ntBASIC4.93□□□□□ -1.62
CDH11P55287 FTLP19-201ENST00000433300 394 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC006335.2-201ENST00000437993 330 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AL450996.1-201ENST00000445574 1202 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH11P55287 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 SIAH1P1-201ENST00000479411 923 ntBASIC4.93□□□□□ -1.62
CDH11P55287 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH11P55287 ENPP7P11-201ENST00000505915 627 ntBASIC4.93□□□□□ -1.62
CDH11P55287 IMPA1P1-201ENST00000510718 842 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC016559.2-201ENST00000510759 359 ntBASIC4.93□□□□□ -1.62
CDH11P55287 HMGB1P47-201ENST00000511281 589 ntBASIC4.93□□□□□ -1.62
CDH11P55287 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 AC016550.3-201ENST00000515706 767 ntBASIC4.93□□□□□ -1.62
CDH11P55287 SCARNA20.4-201ENST00000516969 131 ntBASIC4.93□□□□□ -1.62
CDH11P55287 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 MIR1273E-201ENST00000581165 102 ntBASIC4.93□□□□□ -1.62
CDH11P55287 MIR3176-201ENST00000582210 90 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 BNIP3P39-201ENST00000601077 554 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC135178.6-201ENST00000605314 398 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 AC011755.1-201ENST00000623763 2049 ntBASIC4.93□□□□□ -1.62
CDH11P55287 AC019080.5-201ENST00000624891 757 ntBASIC4.93□□□□□ -1.62
CDH11P55287 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CDH11P55287 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CDH11P55287 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 DDX18P6-201ENST00000450119 1997 ntBASIC4.93□□□□□ -1.62
CDH11P55287 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH11P55287 AC017002.4-201ENST00000604721 1525 ntBASIC4.92□□□□□ -1.62
CDH11P55287 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 AC009501.3-201ENST00000605001 1352 ntBASIC4.92□□□□□ -1.62
CDH11P55287 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 AC073136.1-201ENST00000449426 2884 ntBASIC4.92□□□□□ -1.62
CDH11P55287 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 AC092111.2-201ENST00000611627 1414 ntBASIC4.92□□□□□ -1.62
CDH11P55287 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 RN7SKP59-201ENST00000410520 314 ntBASIC4.92□□□□□ -1.62
CDH11P55287 RNA5SP296-201ENST00000410523 111 ntBASIC4.92□□□□□ -1.62
CDH11P55287 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH11P55287 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDH11P55287 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms