Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.94□□□□□ -1.3
CLTCL1P53675 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CLTCL1P53675 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.94□□□□□ -1.3
CLTCL1P53675 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CLTCL1P53675 MIR298-201ENST00000401212 88 ntBASIC6.94□□□□□ -1.3
CLTCL1P53675 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 QRSL1P2-201ENST00000418582 964 ntBASIC6.94□□□□□ -1.3
CLTCL1P53675 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.94□□□□□ -1.3
CLTCL1P53675 RN7SKP122-201ENST00000515923 296 ntBASIC6.94□□□□□ -1.3
CLTCL1P53675 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.94□□□□□ -1.3
CLTCL1P53675 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.94□□□□□ -1.3
CLTCL1P53675 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CLTCL1P53675 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.94□□□□□ -1.3
CLTCL1P53675 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.94□□□□□ -1.3
CLTCL1P53675 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.94□□□□□ -1.3
CLTCL1P53675 AC115286.1-201ENST00000604298 434 ntBASIC6.94□□□□□ -1.3
CLTCL1P53675 AL359757.1-201ENST00000623176 255 ntBASIC6.94□□□□□ -1.3
CLTCL1P53675 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.94□□□□□ -1.3
CLTCL1P53675 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLTCL1P53675 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLTCL1P53675 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLTCL1P53675 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.93□□□□□ -1.3
CLTCL1P53675 OR56B2P-202ENST00000641377 2453 ntBASIC6.93□□□□□ -1.3
CLTCL1P53675 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CLTCL1P53675 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLTCL1P53675 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
CLTCL1P53675 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.93□□□□□ -1.3
CLTCL1P53675 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.93□□□□□ -1.3
CLTCL1P53675 ARL4AP5-201ENST00000404372 599 ntBASIC6.93□□□□□ -1.3
CLTCL1P53675 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CLTCL1P53675 RSL24D1P6-201ENST00000426934 401 ntBASIC6.93□□□□□ -1.3
CLTCL1P53675 NIFKP7-201ENST00000503365 834 ntBASIC6.93□□□□□ -1.3
CLTCL1P53675 RNU6-709P-201ENST00000517257 104 ntBASIC6.93□□□□□ -1.3
CLTCL1P53675 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.93□□□□□ -1.3
CLTCL1P53675 CCT8P1-201ENST00000413611 1657 ntBASIC6.93□□□□□ -1.3
CLTCL1P53675 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLTCL1P53675 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CLTCL1P53675 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CLTCL1P53675 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.92□□□□□ -1.3
CLTCL1P53675 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.92□□□□□ -1.3
CLTCL1P53675 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.92□□□□□ -1.3
CLTCL1P53675 U3.22-201ENST00000391120 215 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 ARL2BPP10-201ENST00000446487 531 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 AL161722.1-201ENST00000446972 1032 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 AC004980.3-201ENST00000447046 365 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 AC020898.1-201ENST00000474167 787 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 IGBP1P5-201ENST00000507524 1000 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 AP001781.1-201ENST00000530977 207 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 AC009643.1-201ENST00000532030 391 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 AC068831.4-201ENST00000556118 109 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
CLTCL1P53675 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CLTCL1P53675 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CLTCL1P53675 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 ZFRP1-201ENST00000457579 2970 ntBASIC6.92□□□□□ -1.3
CLTCL1P53675 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.92□□□□□ -1.3
CLTCL1P53675 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLTCL1P53675 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLTCL1P53675 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLTCL1P53675 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.91□□□□□ -1.3
CLTCL1P53675 SNORA70.2-201ENST00000364506 135 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 MIR659-201ENST00000384963 97 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 RPL21P67-201ENST00000402896 478 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 VN1R37P-201ENST00000419096 748 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 RPL7P57-201ENST00000423238 740 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.91□□□□□ -1.3
CLTCL1P53675 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.91□□□□□ -1.3
CLTCL1P53675 RNU1-6P-201ENST00000516290 144 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 AP002981.1-201ENST00000517692 975 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.91□□□□□ -1.3
CLTCL1P53675 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.91□□□□□ -1.3
CLTCL1P53675 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.91□□□□□ -1.3
CLTCL1P53675 AGGF1P9-201ENST00000561884 913 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 AC093249.4-201ENST00000564755 259 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 AC136624.4-201ENST00000573044 370 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 RPL26P30-202ENST00000602923 645 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.91□□□□□ -1.3
CLTCL1P53675 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLTCL1P53675 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLTCL1P53675 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CLTCL1P53675 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.91□□□□□ -1.3
CLTCL1P53675 AC092376.2-201ENST00000622621 4116 ntBASIC6.91□□□□□ -1.3
CLTCL1P53675 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CLTCL1P53675 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLTCL1P53675 RNA5SP447-201ENST00000363749 119 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms