Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.88□□□□□ -1.47
COPAP53621 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.88□□□□□ -1.47
COPAP53621 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.88□□□□□ -1.47
COPAP53621 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.88□□□□□ -1.47
COPAP53621 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.88□□□□□ -1.47
COPAP53621 AC091057.3-201ENST00000602684 733 ntBASIC5.88□□□□□ -1.47
COPAP53621 AC023762.1-201ENST00000603280 584 ntBASIC5.88□□□□□ -1.47
COPAP53621 AC013244.3-201ENST00000605614 388 ntBASIC5.88□□□□□ -1.47
COPAP53621 AC112503.1-201ENST00000608436 391 ntBASIC5.88□□□□□ -1.47
COPAP53621 AC124016.2-201ENST00000610058 665 ntBASIC5.88□□□□□ -1.47
COPAP53621 RNU6-1192P-201ENST00000612197 107 ntBASIC5.88□□□□□ -1.47
COPAP53621 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 RNU6-489P-201ENST00000618289 107 ntBASIC5.88□□□□□ -1.47
COPAP53621 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPAP53621 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPAP53621 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COPAP53621 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 AC007342.7-201ENST00000624610 2337 ntBASIC5.88□□□□□ -1.47
COPAP53621 THAP12P9-201ENST00000503971 2360 ntBASIC5.88□□□□□ -1.47
COPAP53621 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.88□□□□□ -1.47
COPAP53621 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COPAP53621 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COPAP53621 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 SPATA2P1-201ENST00000431223 2055 ntBASIC5.87□□□□□ -1.47
COPAP53621 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 ADAM24P-201ENST00000398655 2101 ntBASIC5.87□□□□□ -1.47
COPAP53621 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 STX3-208ENST00000641815 3236 ntBASIC5.87□□□□□ -1.47
COPAP53621 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
COPAP53621 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.87□□□□□ -1.47
COPAP53621 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 RN7SKP28-201ENST00000364770 305 ntBASIC5.87□□□□□ -1.47
COPAP53621 RNU6-468P-201ENST00000384003 109 ntBASIC5.87□□□□□ -1.47
COPAP53621 RPL22P22-201ENST00000395439 379 ntBASIC5.87□□□□□ -1.47
COPAP53621 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 HMGB3P19-201ENST00000403971 560 ntBASIC5.87□□□□□ -1.47
COPAP53621 AL158825.1-201ENST00000414735 521 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.87□□□□□ -1.47
COPAP53621 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.87□□□□□ -1.47
COPAP53621 RPS26P41-201ENST00000450370 284 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.87□□□□□ -1.47
COPAP53621 AC098826.2-201ENST00000452011 651 ntBASIC5.87□□□□□ -1.47
COPAP53621 RSU1P1-201ENST00000453416 441 ntBASIC5.87□□□□□ -1.47
COPAP53621 FRG2FP-204ENST00000453982 852 ntBASIC5.87□□□□□ -1.47
COPAP53621 RN7SL72P-201ENST00000460697 269 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC104982.1-201ENST00000478775 574 ntBASIC5.87□□□□□ -1.47
COPAP53621 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 TPT1P3-201ENST00000492841 512 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC009120.1-201ENST00000493458 473 ntBASIC5.87□□□□□ -1.47
COPAP53621 OR7E157P-201ENST00000494376 911 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 DUTP7-201ENST00000507982 486 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC111000.6-201ENST00000514471 709 ntBASIC5.87□□□□□ -1.47
COPAP53621 SCARNA6.1-201ENST00000516989 238 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC027308.1-201ENST00000517993 110 ntBASIC5.87□□□□□ -1.47
COPAP53621 IGKV2-18-201ENST00000522607 343 ntBASIC5.87□□□□□ -1.47
COPAP53621 IGBP1P1-201ENST00000554337 1009 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.87□□□□□ -1.47
COPAP53621 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 MIR1273E-201ENST00000581165 102 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 AC011492.1-201ENST00000600023 315 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC068313.1-201ENST00000604028 1008 ntBASIC5.87□□□□□ -1.47
COPAP53621 AC245100.7-201ENST00000609678 442 ntBASIC5.87□□□□□ -1.47
COPAP53621 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.87□□□□□ -1.47
COPAP53621 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.87□□□□□ -1.47
COPAP53621 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.87□□□□□ -1.47
COPAP53621 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COPAP53621 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COPAP53621 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.87□□□□□ -1.47
COPAP53621 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.87□□□□□ -1.47
COPAP53621 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COPAP53621 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COPAP53621 AC016745.2-201ENST00000608834 3443 ntBASIC5.86□□□□□ -1.47
COPAP53621 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
COPAP53621 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms