Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-1P43699 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 SNORA72.3-201ENST00000365074 132 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC007618.1-201ENST00000366455 732 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-1P43699 RNU6-452P-201ENST00000384406 107 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 RNU6-244P-201ENST00000391028 104 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 RPL21P67-201ENST00000402896 478 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AL096711.1-201ENST00000404780 554 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 PCNPP4-201ENST00000414817 517 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 OR5M12P-201ENST00000423388 929 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AL139158.1-201ENST00000424719 340 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 HSPD1P12-201ENST00000429127 1069 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 GAPDHP48-201ENST00000436626 961 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AL596266.1-201ENST00000448132 400 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 NPM1P39-201ENST00000449818 867 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 NPM1P19-201ENST00000450070 712 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 HMGB1P7-201ENST00000450921 612 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 GEMIN2P1-201ENST00000454246 752 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 TVP23BP2-201ENST00000455082 615 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 RNU7-27P-201ENST00000459281 62 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 RPL21P6-201ENST00000479171 504 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC069304.1-201ENST00000491593 704 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC093801.2-201ENST00000503966 1050 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC010374.2-201ENST00000512933 535 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC133963.2-201ENST00000513686 578 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 PRMT5P1-201ENST00000514351 598 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 RNA5SP441-201ENST00000516809 88 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.52□□□□□ -1.69
NKX2-1P43699 TRIM51DP-201ENST00000529746 596 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NKX2-1P43699 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 MTCYBP13-201ENST00000578634 1093 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 MIR4311-201ENST00000580794 100 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 MIR4701-201ENST00000583094 63 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 PRPF19P1-201ENST00000584766 898 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC090330.1-201ENST00000588646 764 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 AC108738.1-201ENST00000603703 237 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AP000864.1-201ENST00000609424 650 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AC022960.3-201ENST00000619794 441 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 AL357140.4-201ENST00000636827 412 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 SAMMSON-227ENST00000642114 1199 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.52□□□□□ -1.69
NKX2-1P43699 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
NKX2-1P43699 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NKX2-1P43699 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
NKX2-1P43699 HSPD1P11-201ENST00000508643 1702 ntBASIC4.52□□□□□ -1.69
NKX2-1P43699 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.52□□□□□ -1.69
NKX2-1P43699 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 CCT8P1-201ENST00000413611 1657 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 MRRFP1-201ENST00000435941 1675 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 DDX18P4-201ENST00000511690 1966 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NKX2-1P43699 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NKX2-1P43699 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NKX2-1P43699 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.51□□□□□ -1.69
NKX2-1P43699 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NKX2-1P43699 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NKX2-1P43699 YWHAZP6-201ENST00000399764 738 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AP000357.1-201ENST00000409926 1165 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 RN7SKP86-201ENST00000410454 332 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 RN7SKP29-201ENST00000410957 272 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AC010385.1-201ENST00000412374 256 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.51□□□□□ -1.69
NKX2-1P43699 AL035422.1-201ENST00000414193 397 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 COX5BP7-201ENST00000414780 274 ntBASIC4.51□□□□□ -1.69
NKX2-1P43699 LINC01347-201ENST00000417964 355 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms