Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC012400.1-201ENST00000518452 381 ntBASIC4.77□□□□□ -1.65
RFC3P40938 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.77□□□□□ -1.65
RFC3P40938 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 AP002373.2-201ENST00000541631 1060 ntBASIC4.77□□□□□ -1.65
RFC3P40938 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.77□□□□□ -1.65
RFC3P40938 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RFC3P40938 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.77□□□□□ -1.65
RFC3P40938 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.77□□□□□ -1.65
RFC3P40938 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 AL356752.1-201ENST00000615844 593 ntBASIC4.77□□□□□ -1.65
RFC3P40938 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
RFC3P40938 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 AL731566.1-201ENST00000620490 1937 ntBASIC4.77□□□□□ -1.65
RFC3P40938 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RFC3P40938 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RFC3P40938 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.77□□□□□ -1.65
RFC3P40938 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFC3P40938 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RFC3P40938 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 AC112198.2-201ENST00000426589 6996 ntBASIC4.76□□□□□ -1.65
RFC3P40938 SMG1P7-201ENST00000565246 2704 ntBASIC4.76□□□□□ -1.65
RFC3P40938 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
RFC3P40938 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 SNURFL-201ENST00000309296 343 ntBASIC4.76□□□□□ -1.65
RFC3P40938 RN7SKP103-201ENST00000363848 320 ntBASIC4.76□□□□□ -1.65
RFC3P40938 RNA5SP455-201ENST00000365190 119 ntBASIC4.76□□□□□ -1.65
RFC3P40938 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.76□□□□□ -1.65
RFC3P40938 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.76□□□□□ -1.65
RFC3P40938 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFC3P40938 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.76□□□□□ -1.65
RFC3P40938 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.76□□□□□ -1.65
RFC3P40938 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.76□□□□□ -1.65
RFC3P40938 Z80107.2-201ENST00000445127 392 ntBASIC4.76□□□□□ -1.65
RFC3P40938 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.76□□□□□ -1.65
RFC3P40938 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.76□□□□□ -1.65
RFC3P40938 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
RFC3P40938 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.76□□□□□ -1.65
RFC3P40938 OR4A17P-201ENST00000526032 904 ntBASIC4.76□□□□□ -1.65
RFC3P40938 AC079064.1-201ENST00000528365 362 ntBASIC4.76□□□□□ -1.65
RFC3P40938 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.76□□□□□ -1.65
RFC3P40938 MTND2P17-201ENST00000550281 688 ntBASIC4.76□□□□□ -1.65
RFC3P40938 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.76□□□□□ -1.65
RFC3P40938 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.76□□□□□ -1.65
RFC3P40938 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.76□□□□□ -1.65
RFC3P40938 AL139124.1-201ENST00000609123 421 ntBASIC4.76□□□□□ -1.65
RFC3P40938 AC100827.5-201ENST00000615883 426 ntBASIC4.76□□□□□ -1.65
RFC3P40938 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.76□□□□□ -1.65
RFC3P40938 RBPJP2-201ENST00000618187 1444 ntBASIC4.76□□□□□ -1.65
RFC3P40938 AP003400.3-201ENST00000624904 346 ntBASIC4.76□□□□□ -1.65
RFC3P40938 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFC3P40938 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.76□□□□□ -1.65
RFC3P40938 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 AL731532.2-201ENST00000623542 1953 ntBASIC4.76□□□□□ -1.65
RFC3P40938 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.76□□□□□ -1.65
RFC3P40938 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.76□□□□□ -1.65
RFC3P40938 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFC3P40938 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
RFC3P40938 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 AC103591.2-201ENST00000265259 766 ntBASIC4.75□□□□□ -1.65
RFC3P40938 U3.3-201ENST00000362986 216 ntBASIC4.75□□□□□ -1.65
RFC3P40938 RNA5SP123-201ENST00000363244 119 ntBASIC4.75□□□□□ -1.65
RFC3P40938 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RFC3P40938 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFC3P40938 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFC3P40938 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFC3P40938 AC092447.2-201ENST00000435487 669 ntBASIC4.75□□□□□ -1.65
RFC3P40938 RPS29P10-201ENST00000439197 166 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AL359265.1-201ENST00000440296 795 ntBASIC4.75□□□□□ -1.65
RFC3P40938 SNRPFP2-201ENST00000440710 251 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.75□□□□□ -1.65
RFC3P40938 DNAJB5P1-201ENST00000454004 806 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AC091685.2-201ENST00000454924 864 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AC108161.1-201ENST00000461060 402 ntBASIC4.75□□□□□ -1.65
RFC3P40938 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.75□□□□□ -1.65
RFC3P40938 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RFC3P40938 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms