Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 AC114781.5-201ENST00000615297 108 ntBASIC5.93□□□□□ -1.46
SCN4AP35499 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN4AP35499 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.93□□□□□ -1.46
SCN4AP35499 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.93□□□□□ -1.46
SCN4AP35499 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SCN4AP35499 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SCN4AP35499 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.93□□□□□ -1.46
SCN4AP35499 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SCN4AP35499 MIR133A2-201ENST00000347538 102 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 OR6C69P-201ENST00000394268 893 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 AL136116.2-201ENST00000404020 785 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 RNA5SP345-201ENST00000410646 108 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.92□□□□□ -1.46
SCN4AP35499 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.92□□□□□ -1.46
SCN4AP35499 SNORA84-201ENST00000459229 133 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 RN7SL441P-201ENST00000492388 296 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN4AP35499 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.92□□□□□ -1.46
SCN4AP35499 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN4AP35499 AC093765.1-201ENST00000603758 881 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SCN4AP35499 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SCN4AP35499 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.92□□□□□ -1.46
SCN4AP35499 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SCN4AP35499 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SCN4AP35499 RNA5SP453-201ENST00000362503 119 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 RNA5SP509-201ENST00000364577 119 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 EEF1A1P1-201ENST00000447052 739 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 AC020779.1-201ENST00000478757 796 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 AC005412.2-201ENST00000492004 341 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 MTCO1P35-201ENST00000515270 228 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 AP001781.1-201ENST00000530977 207 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 NPM1P5-201ENST00000557228 838 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SCN4AP35499 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.92□□□□□ -1.46
SCN4AP35499 AC015712.7-201ENST00000615211 635 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 AL161637.1-201ENST00000622380 412 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.92□□□□□ -1.46
SCN4AP35499 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SCN4AP35499 AC108751.5-201ENST00000492880 1336 ntBASIC5.92□□□□□ -1.46
SCN4AP35499 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SCN4AP35499 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 SMG1P7-201ENST00000565246 2704 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
SCN4AP35499 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.91□□□□□ -1.46
SCN4AP35499 AL359837.1-201ENST00000381357 287 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.91□□□□□ -1.46
SCN4AP35499 ATG4AP1-201ENST00000416893 538 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 RAD23BP1-201ENST00000421404 1227 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 MTND2P40-201ENST00000436718 841 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 AC114755.5-201ENST00000447760 831 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.91□□□□□ -1.46
SCN4AP35499 MIR4429-201ENST00000580105 73 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 MIR3138-201ENST00000585238 82 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 uc_338.7-201ENST00000621834 124 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 AC005618.4-201ENST00000625053 554 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 ECM1P2-201ENST00000503354 1577 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.91□□□□□ -1.46
SCN4AP35499 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.91□□□□□ -1.46
SCN4AP35499 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
SCN4AP35499 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SCN4AP35499 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 RBPJP2-201ENST00000618187 1444 ntBASIC5.91□□□□□ -1.46
SCN4AP35499 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SCN4AP35499 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms