Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPN3P26045 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
PTPN3P26045 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.56
PTPN3P26045 AC026523.2-201ENST00000625039 7739 ntBASIC5.34□□□□□ -1.56
PTPN3P26045 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.34□□□□□ -1.56
PTPN3P26045 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
PTPN3P26045 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN3P26045 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 AL031595.2-201ENST00000624215 19071 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 TRIM51GP-201ENST00000534741 1350 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTPN3P26045 RNA5SP90-201ENST00000364801 99 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 RNA5SP223-201ENST00000365174 120 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 RNU1-74P-201ENST00000384108 171 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 RNA5SP187-201ENST00000384400 119 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 SNORA67-201ENST00000384423 137 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 SETP10-201ENST00000424368 814 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 RPL23AP4-201ENST00000427757 463 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 MTATP6P11-201ENST00000428071 670 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AL161722.2-201ENST00000434731 981 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 SPRYD7P1-201ENST00000443861 570 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AC017099.1-201ENST00000448261 1028 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AC090602.1-201ENST00000469695 252 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 AC015864.1-201ENST00000496512 544 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN3P26045 RNU6-760P-201ENST00000516078 97 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN3P26045 AC074029.2-201ENST00000551045 634 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AC127381.1-201ENST00000555979 939 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN3P26045 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN3P26045 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN3P26045 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN3P26045 FKBP1AP1-201ENST00000594588 318 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN3P26045 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN3P26045 AC118658.2-201ENST00000618697 459 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN3P26045 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN3P26045 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN3P26045 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN3P26045 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTPN3P26045 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
PTPN3P26045 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN3P26045 AC125336.1-201ENST00000508893 2827 ntBASIC5.33□□□□□ -1.56
PTPN3P26045 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPN3P26045 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PTPN3P26045 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN3P26045 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN3P26045 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PTPN3P26045 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PTPN3P26045 AL450345.1-202ENST00000605741 3881 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN3P26045 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN3P26045 RN7SKP160-201ENST00000363804 340 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN3P26045 OR8V1P-201ENST00000395193 873 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 PEX12P1-201ENST00000400284 1048 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AMZ2P2-201ENST00000406819 1057 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 RN7SKP206-201ENST00000410823 293 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AC002524.1-201ENST00000411687 547 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN3P26045 BTF3P9-201ENST00000418784 283 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 AC093655.2-201ENST00000425735 631 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN3P26045 CFL1P1-202ENST00000432948 411 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 RPS15AP29-201ENST00000445539 400 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 BX842559.2-201ENST00000451418 605 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN3P26045 AC011225.1-201ENST00000457751 369 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AL049874.2-201ENST00000492636 288 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 RPS4XP20-201ENST00000505751 772 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 PGAM1P13-201ENST00000507497 754 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 SNORA70.11-201ENST00000515987 138 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 RNU6-491P-201ENST00000516099 110 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 SNORA70.13-201ENST00000516116 138 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN3P26045 AC100784.1-201ENST00000522790 310 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AC018442.3-201ENST00000523025 183 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN3P26045 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 AC092868.3-201ENST00000560515 784 ntBASIC5.32□□□□□ -1.56
PTPN3P26045 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN3P26045 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN3P26045 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms