Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CD40P25942 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.62□□□□□ -1.51
CD40P25942 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CD40P25942 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 RPL11P4-201ENST00000332269 436 ntBASIC5.61□□□□□ -1.51
CD40P25942 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 FAM32BP-201ENST00000344033 333 ntBASIC5.61□□□□□ -1.51
CD40P25942 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CD40P25942 TPMTP3-201ENST00000411928 735 ntBASIC5.61□□□□□ -1.51
CD40P25942 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.61□□□□□ -1.51
CD40P25942 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 MTND4P26-201ENST00000415971 1359 ntBASIC5.61□□□□□ -1.51
CD40P25942 RPL21P50-201ENST00000417698 477 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.61□□□□□ -1.51
CD40P25942 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 RPS3AP44-201ENST00000425466 790 ntBASIC5.61□□□□□ -1.51
CD40P25942 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 MTCO3P21-201ENST00000430791 643 ntBASIC5.61□□□□□ -1.51
CD40P25942 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 MTCO1P19-201ENST00000443487 500 ntBASIC5.61□□□□□ -1.51
CD40P25942 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.61□□□□□ -1.51
CD40P25942 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 RPL23AP35-201ENST00000451906 501 ntBASIC5.61□□□□□ -1.51
CD40P25942 OR6C5P-201ENST00000452388 923 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 KATNBL1P6-201ENST00000453433 915 ntBASIC5.61□□□□□ -1.51
CD40P25942 AL139156.3-201ENST00000454802 394 ntBASIC5.61□□□□□ -1.51
CD40P25942 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 RN7SL552P-201ENST00000462094 276 ntBASIC5.61□□□□□ -1.51
CD40P25942 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 MRE11P1-201ENST00000464884 2127 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC022415.1-202ENST00000486612 523 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC022206.1-201ENST00000495947 347 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 AC060788.1-201ENST00000521318 469 ntBASIC5.61□□□□□ -1.51
CD40P25942 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 OR5AK1P-201ENST00000524837 922 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC022880.1-201ENST00000534017 973 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.61□□□□□ -1.51
CD40P25942 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 AC244034.2-201ENST00000562504 509 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC016180.1-201ENST00000567945 403 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC138915.2-201ENST00000569776 97 ntBASIC5.61□□□□□ -1.51
CD40P25942 MTND4P34-201ENST00000572715 1371 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AC015818.6-201ENST00000584274 634 ntBASIC5.61□□□□□ -1.51
CD40P25942 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AC008759.1-201ENST00000589783 983 ntBASIC5.61□□□□□ -1.51
CD40P25942 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 AC022146.1-201ENST00000595307 847 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 AC004987.4-201ENST00000603383 338 ntBASIC5.61□□□□□ -1.51
CD40P25942 AL391497.1-201ENST00000608671 547 ntBASIC5.61□□□□□ -1.51
CD40P25942 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.61□□□□□ -1.51
CD40P25942 AC005332.6-201ENST00000613178 446 ntBASIC5.61□□□□□ -1.51
CD40P25942 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CD40P25942 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.61□□□□□ -1.51
CD40P25942 AC003992.1-201ENST00000635364 557 ntBASIC5.61□□□□□ -1.51
CD40P25942 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
CD40P25942 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CD40P25942 AC127070.3-201ENST00000503695 3263 ntBASIC5.61□□□□□ -1.51
CD40P25942 AC110597.1-201ENST00000562669 3176 ntBASIC5.61□□□□□ -1.51
CD40P25942 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.61□□□□□ -1.51
CD40P25942 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.61□□□□□ -1.51
CD40P25942 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms