Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 AL121886.1-201ENST00000358609 435 ntBASIC5.87□□□□□ -1.47
BDNFP23560 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.87□□□□□ -1.47
BDNFP23560 AC073136.2-201ENST00000417282 849 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.87□□□□□ -1.47
BDNFP23560 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.87□□□□□ -1.47
BDNFP23560 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.87□□□□□ -1.47
BDNFP23560 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.87□□□□□ -1.47
BDNFP23560 YWHAZP2-201ENST00000440317 728 ntBASIC5.87□□□□□ -1.47
BDNFP23560 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 NPM1P29-201ENST00000483112 803 ntBASIC5.87□□□□□ -1.47
BDNFP23560 EIF1P7-201ENST00000487533 337 ntBASIC5.87□□□□□ -1.47
BDNFP23560 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.87□□□□□ -1.47
BDNFP23560 RN7SKP253-201ENST00000516424 309 ntBASIC5.87□□□□□ -1.47
BDNFP23560 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
BDNFP23560 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 AC090022.1-201ENST00000546569 311 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.87□□□□□ -1.47
BDNFP23560 MIR4716-201ENST00000579628 84 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC243654.2-201ENST00000612843 443 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC123768.4-201ENST00000616244 701 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC037198.3-201ENST00000616754 526 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.87□□□□□ -1.47
BDNFP23560 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 AC006453.5-201ENST00000636451 619 ntBASIC5.87□□□□□ -1.47
BDNFP23560 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BDNFP23560 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.87□□□□□ -1.47
BDNFP23560 AL034370.1-201ENST00000397254 1590 ntBASIC5.87□□□□□ -1.47
BDNFP23560 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BDNFP23560 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BDNFP23560 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BDNFP23560 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BDNFP23560 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.87□□□□□ -1.47
BDNFP23560 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BDNFP23560 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
BDNFP23560 CYP1D1P-201ENST00000416662 1433 ntBASIC5.86□□□□□ -1.47
BDNFP23560 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BDNFP23560 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
BDNFP23560 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 RNU6-317P-201ENST00000384031 107 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AL590290.1-201ENST00000405336 380 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 METTL15P3-201ENST00000415522 1221 ntBASIC5.86□□□□□ -1.47
BDNFP23560 RNF10P1-201ENST00000418589 369 ntBASIC5.86□□□□□ -1.47
BDNFP23560 MARK2P12-201ENST00000420129 585 ntBASIC5.86□□□□□ -1.47
BDNFP23560 MTND4P24-201ENST00000424002 397 ntBASIC5.86□□□□□ -1.47
BDNFP23560 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 AL590399.2-201ENST00000427536 309 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.86□□□□□ -1.47
BDNFP23560 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 CBX1P4-201ENST00000439415 457 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AC092685.1-201ENST00000447960 1243 ntBASIC5.86□□□□□ -1.47
BDNFP23560 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 AC108751.3-201ENST00000461814 1020 ntBASIC5.86□□□□□ -1.47
BDNFP23560 RN7SL177P-201ENST00000476596 299 ntBASIC5.86□□□□□ -1.47
BDNFP23560 RN7SL629P-201ENST00000489622 285 ntBASIC5.86□□□□□ -1.47
BDNFP23560 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 AC025459.1-201ENST00000504072 156 ntBASIC5.86□□□□□ -1.47
BDNFP23560 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.86□□□□□ -1.47
BDNFP23560 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 FKBP1AP1-201ENST00000594588 318 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 AP001267.4-201ENST00000602598 545 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AL353729.2-201ENST00000605859 1249 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AL355816.1-201ENST00000607951 118 ntBASIC5.86□□□□□ -1.47
BDNFP23560 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.86□□□□□ -1.47
BDNFP23560 AC055764.2-201ENST00000610089 670 ntBASIC5.86□□□□□ -1.47
BDNFP23560 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BDNFP23560 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.86□□□□□ -1.47
BDNFP23560 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.86□□□□□ -1.47
BDNFP23560 ZNF90P1-201ENST00000480493 1951 ntBASIC5.86□□□□□ -1.47
BDNFP23560 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
BDNFP23560 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms