Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFRAP16234 AC006427.1-201ENST00000514359 712 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 EIF3KP3-201ENST00000514461 639 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFRAP16234 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFRAP16234 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFRAP16234 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFRAP16234 AC027369.5-201ENST00000533838 755 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFRAP16234 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.5□□□□□ -1.53
PDGFRAP16234 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.5□□□□□ -1.53
PDGFRAP16234 AC069307.1-201ENST00000602820 447 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 AC013244.1-201ENST00000604279 193 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 BX322635.1-201ENST00000605804 496 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFRAP16234 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.5□□□□□ -1.53
PDGFRAP16234 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFRAP16234 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
PDGFRAP16234 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFRAP16234 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFRAP16234 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.5□□□□□ -1.53
PDGFRAP16234 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFRAP16234 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.5□□□□□ -1.53
PDGFRAP16234 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFRAP16234 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFRAP16234 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 AP005435.3-201ENST00000531260 3198 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AP000473.2-201ENST00000602659 1537 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDGFRAP16234 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AL356806.1-201ENST00000422524 916 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AL161722.2-201ENST00000434731 981 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFRAP16234 ARL5AP3-201ENST00000439327 386 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 CNOT7P2-201ENST00000441051 832 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 MYO5BP2-201ENST00000449815 1277 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 GAPDHP14-201ENST00000450472 937 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AC026348.1-201ENST00000462549 1053 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC079841.1-201ENST00000481228 950 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC015864.1-201ENST00000496512 544 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC008953.1-201ENST00000497334 318 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFRAP16234 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 RPS4XP20-201ENST00000505751 772 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 FTH1P11-201ENST00000517577 551 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC012400.1-201ENST00000518452 381 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFRAP16234 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 AL390334.1-201ENST00000556395 450 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC018552.1-201ENST00000562099 811 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC122134.1-201ENST00000565664 1104 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC016180.1-201ENST00000567945 403 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFRAP16234 MTCYBP13-201ENST00000578634 1093 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 RN7SL708P-201ENST00000580952 299 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFRAP16234 AC008814.1-201ENST00000603797 406 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC007620.3-201ENST00000608131 497 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC126915.2-201ENST00000610957 190 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 RMST_5.1-201ENST00000618704 126 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 AC091932.2-201ENST00000623014 291 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFRAP16234 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFRAP16234 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 RLIMP2-201ENST00000427891 1563 ntBASIC5.49□□□□□ -1.53
PDGFRAP16234 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFRAP16234 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDGFRAP16234 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDGFRAP16234 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFRAP16234 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC004158.1-201ENST00000564508 4319 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFRAP16234 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFRAP16234 RNA5SP90-201ENST00000364801 99 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFRAP16234 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDGFRAP16234 RPL12P9-201ENST00000412942 488 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 BMS1P13-201ENST00000417301 885 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AL139148.1-201ENST00000427122 680 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFRAP16234 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFRAP16234 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFRAP16234 AC008638.1-201ENST00000506035 866 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AC006499.3-201ENST00000506077 748 ntBASIC5.48□□□□□ -1.53
PDGFRAP16234 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms