Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SCARNA15-201ENST00000607520 4325 ntBASIC5.96□□□□□ -1.46
TOP1P11387 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP1P11387 AL353625.1-202ENST00000366273 571 ntBASIC5.96□□□□□ -1.46
TOP1P11387 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TOP1P11387 AL390316.1-201ENST00000406279 553 ntBASIC5.96□□□□□ -1.46
TOP1P11387 AL121878.1-201ENST00000418638 859 ntBASIC5.96□□□□□ -1.46
TOP1P11387 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.96□□□□□ -1.46
TOP1P11387 RPS27P18-201ENST00000431701 247 ntBASIC5.96□□□□□ -1.46
TOP1P11387 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.96□□□□□ -1.46
TOP1P11387 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.96□□□□□ -1.46
TOP1P11387 RPL7P61-201ENST00000451721 751 ntBASIC5.96□□□□□ -1.46
TOP1P11387 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 RN7SL244P-201ENST00000493405 297 ntBASIC5.96□□□□□ -1.46
TOP1P11387 NDUFB5P1-201ENST00000508134 564 ntBASIC5.96□□□□□ -1.46
TOP1P11387 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.96□□□□□ -1.46
TOP1P11387 KCTD9P6-201ENST00000522306 950 ntBASIC5.96□□□□□ -1.46
TOP1P11387 OR5AZ1P-201ENST00000527448 943 ntBASIC5.96□□□□□ -1.46
TOP1P11387 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP1P11387 AC105254.2-201ENST00000603636 436 ntBASIC5.96□□□□□ -1.46
TOP1P11387 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.96□□□□□ -1.46
TOP1P11387 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.96□□□□□ -1.46
TOP1P11387 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP1P11387 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP1P11387 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TOP1P11387 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TOP1P11387 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.95□□□□□ -1.46
TOP1P11387 RN7SKP104-201ENST00000362605 328 ntBASIC5.95□□□□□ -1.46
TOP1P11387 RNA5SP123-201ENST00000363244 119 ntBASIC5.95□□□□□ -1.46
TOP1P11387 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 SNORA2.3-201ENST00000383920 135 ntBASIC5.95□□□□□ -1.46
TOP1P11387 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP1P11387 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP1P11387 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP1P11387 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP1P11387 BX323845.1-201ENST00000432417 179 ntBASIC5.95□□□□□ -1.46
TOP1P11387 AC006484.1-201ENST00000435086 1884 ntBASIC5.95□□□□□ -1.46
TOP1P11387 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.95□□□□□ -1.46
TOP1P11387 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP1P11387 AC231760.1-201ENST00000498002 260 ntBASIC5.95□□□□□ -1.46
TOP1P11387 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 AC100784.1-201ENST00000522790 310 ntBASIC5.95□□□□□ -1.46
TOP1P11387 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP1P11387 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP1P11387 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP1P11387 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP1P11387 AC006363.1-201ENST00000603806 463 ntBASIC5.95□□□□□ -1.46
TOP1P11387 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.95□□□□□ -1.46
TOP1P11387 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
TOP1P11387 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.95□□□□□ -1.46
TOP1P11387 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP1P11387 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TOP1P11387 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TOP1P11387 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TOP1P11387 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TOP1P11387 AC007996.1-201ENST00000620414 2821 ntBASIC5.94□□□□□ -1.46
TOP1P11387 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TOP1P11387 RNA5SP428-201ENST00000365129 132 ntBASIC5.94□□□□□ -1.46
TOP1P11387 SNORA66-201ENST00000384792 133 ntBASIC5.94□□□□□ -1.46
TOP1P11387 MIR550A3-201ENST00000390735 95 ntBASIC5.94□□□□□ -1.46
TOP1P11387 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TOP1P11387 AC016769.2-201ENST00000414815 475 ntBASIC5.94□□□□□ -1.46
TOP1P11387 PCNPP4-201ENST00000414817 517 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AL590762.4-201ENST00000425885 253 ntBASIC5.94□□□□□ -1.46
TOP1P11387 RPL12P18-201ENST00000437175 325 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP1P11387 AL354714.3-201ENST00000447284 493 ntBASIC5.94□□□□□ -1.46
TOP1P11387 TRY2P-201ENST00000448860 689 ntBASIC5.94□□□□□ -1.46
TOP1P11387 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.94□□□□□ -1.46
TOP1P11387 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TOP1P11387 AC010350.1-201ENST00000504908 231 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP1P11387 RNA5SP43-201ENST00000516559 110 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AC020937.1-201ENST00000519677 1013 ntBASIC5.94□□□□□ -1.46
TOP1P11387 NMNAT1P1-201ENST00000554095 876 ntBASIC5.94□□□□□ -1.46
TOP1P11387 OR1F2P-201ENST00000570470 933 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AC022884.2-201ENST00000578535 580 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.94□□□□□ -1.46
TOP1P11387 AC091905.4-201ENST00000623432 202 ntBASIC5.94□□□□□ -1.46
TOP1P11387 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.94□□□□□ -1.46
TOP1P11387 CR382285.2-201ENST00000624662 1495 ntBASIC5.94□□□□□ -1.46
TOP1P11387 HSPA8P14-201ENST00000552265 1805 ntBASIC5.94□□□□□ -1.46
TOP1P11387 INTS6P1-201ENST00000504674 2530 ntBASIC5.94□□□□□ -1.46
TOP1P11387 AC004817.4-201ENST00000602396 3625 ntBASIC5.94□□□□□ -1.46
TOP1P11387 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TOP1P11387 AL603750.1-201ENST00000624216 1717 ntBASIC5.94□□□□□ -1.46
TOP1P11387 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.93□□□□□ -1.46
TOP1P11387 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.93□□□□□ -1.46
TOP1P11387 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TOP1P11387 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TOP1P11387 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms