Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC6P09630 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HOXC6P09630 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC6P09630 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC6P09630 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC6P09630 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
HOXC6P09630 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HOXC6P09630 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC6P09630 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC6P09630 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC6P09630 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC6P09630 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC6P09630 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC6P09630 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 RPL7P11-201ENST00000437586 658 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AC112498.1-201ENST00000444401 332 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC6P09630 AC073264.2-201ENST00000448886 166 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC6P09630 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 GAPDHP56-201ENST00000506031 988 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 C1GALT1P3-201ENST00000522049 819 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
HOXC6P09630 AC079064.1-201ENST00000528365 362 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC6P09630 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC6P09630 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC6P09630 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC6P09630 MTND2P13-201ENST00000577438 1039 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AC068790.7-201ENST00000602347 528 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AC105254.2-201ENST00000603636 436 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AL391358.1-201ENST00000605342 190 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC6P09630 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC6P09630 AC099654.6-201ENST00000636487 512 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 AC073869.10-201ENST00000642016 354 ntBASIC5.85□□□□□ -1.47
HOXC6P09630 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC6P09630 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC6P09630 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC6P09630 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
HOXC6P09630 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 AL022322.2-201ENST00000624072 20397 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HOXC6P09630 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 RNU1-74P-201ENST00000384108 171 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HOXC6P09630 SNORA48.4-201ENST00000391089 134 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 RPS16P5-201ENST00000406501 404 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 AC073310.1-201ENST00000423226 1033 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 AC017019.1-201ENST00000426129 261 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 SCAND3P1-201ENST00000439854 1060 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 AC016772.1-201ENST00000444170 1261 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 OR52J1P-201ENST00000450596 932 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 AC063943.1-201ENST00000465434 453 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC6P09630 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC6P09630 RNU4-18P-201ENST00000516751 149 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 NMNAT1P1-201ENST00000554095 876 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC6P09630 AC091042.1-201ENST00000579213 173 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.84□□□□□ -1.47
HOXC6P09630 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC6P09630 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 AC008147.4-201ENST00000617570 1204 ntBASIC5.84□□□□□ -1.47
HOXC6P09630 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.84□□□□□ -1.47
HOXC6P09630 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.84□□□□□ -1.47
HOXC6P09630 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HOXC6P09630 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC6P09630 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HOXC6P09630 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.84□□□□□ -1.48
HOXC6P09630 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 NCOA4P2-201ENST00000340589 1813 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC6P09630 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HOXC6P09630 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms