Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 MIR4489-201ENST00000578869 62 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC241377.1-201ENST00000619797 406 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AC097461.1-201ENST00000568928 2821 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.51□□□□□ -1.69
HLA-DPB1P04440 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPB1P04440 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 CASC19-206ENST00000641028 1430 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 SNORA51.1-201ENST00000363243 140 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 RNU1-146P-201ENST00000364015 165 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 SNORA67-201ENST00000384423 137 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 CKS1BP6-201ENST00000424932 240 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 RPS29P10-201ENST00000439197 166 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AL606490.1-201ENST00000452266 765 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC108751.2-201ENST00000469993 231 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 RPL7P39-201ENST00000481157 744 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 RNA5SP464-201ENST00000516251 108 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC012400.1-201ENST00000518452 381 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC069307.1-201ENST00000602820 447 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AL354950.1-201ENST00000614150 568 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC022467.1-201ENST00000614738 749 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 WBP1LP8-201ENST00000617401 327 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC123912.3-201ENST00000600907 1367 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC011493.1-201ENST00000596753 1632 ntBASIC4.5□□□□□ -1.69
HLA-DPB1P04440 AC092747.4-201ENST00000620519 1861 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC005261.2-201ENST00000593427 4258 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 CDY11P-201ENST00000447168 1651 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AL359922.3-201ENST00000624779 1670 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC092642.1-201ENST00000392417 425 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 NACAP7-201ENST00000407371 609 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 BTG3P1-201ENST00000435859 716 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 RPS26P2-201ENST00000440331 348 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC011225.1-201ENST00000457751 369 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 RPL5P22-201ENST00000480199 884 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC090142.2-201ENST00000483263 416 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 AC015864.1-201ENST00000496512 544 ntBASIC4.49□□□□□ -1.69
HLA-DPB1P04440 RPS26P24-201ENST00000497656 331 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms