Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC090506.2-201ENST00000624521 419 ntBASIC7.79□□□□□ -1.16
RAPGEF3O95398 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.79□□□□□ -1.16
RAPGEF3O95398 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RAPGEF3O95398 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RAPGEF3O95398 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.79□□□□□ -1.16
RAPGEF3O95398 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RAPGEF3O95398 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RAPGEF3O95398 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RAPGEF3O95398 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RAPGEF3O95398 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AL035405.1-201ENST00000400795 710 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC021106.1-201ENST00000509020 1058 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC113192.3-201ENST00000529152 742 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AP001880.2-201ENST00000538233 448 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC079148.1-201ENST00000565944 819 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 AC005776.1-201ENST00000603164 290 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 ABI1P1-201ENST00000603375 1120 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RAPGEF3O95398 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RAPGEF3O95398 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RAPGEF3O95398 DHX40P1-201ENST00000588725 1412 ntBASIC7.78□□□□□ -1.16
RAPGEF3O95398 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RAPGEF3O95398 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RAPGEF3O95398 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RAPGEF3O95398 UGT2B24P-201ENST00000514441 1597 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 CASC19-255ENST00000641733 1385 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 SNORA37-201ENST00000384504 129 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 MIR23B-201ENST00000384832 97 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 RNU4-25P-201ENST00000410569 230 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 RPL23AP1-201ENST00000428990 471 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC073410.1-201ENST00000435125 589 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 AL645638.1-201ENST00000440519 361 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 TXNP2-201ENST00000443918 295 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 CEACAMP6-201ENST00000452007 574 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 TVP23BP2-201ENST00000455082 615 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC079168.1-201ENST00000458741 345 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 ATP5G1P3-201ENST00000463301 410 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC104072.1-201ENST00000568817 668 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC027216.1-201ENST00000577726 685 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC015911.5-201ENST00000587076 451 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC125494.2-201ENST00000602431 657 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC135178.6-201ENST00000605314 398 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AP005432.2-201ENST00000608162 586 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 AC092653.1-201ENST00000608509 531 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RAPGEF3O95398 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.77□□□□□ -1.17
RAPGEF3O95398 DDX6P1-205ENST00000441966 1436 ntBASIC7.77□□□□□ -1.17
RAPGEF3O95398 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RAPGEF3O95398 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RAPGEF3O95398 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RAPGEF3O95398 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 SNORA63.3-201ENST00000362682 132 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RAPGEF3O95398 MIR298-201ENST00000401212 88 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 RSL24D1P1-201ENST00000404972 493 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 TDGF1P1-201ENST00000445734 527 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 EIF2S2P5-201ENST00000457635 968 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC013356.1-201ENST00000489027 564 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 RNU6-491P-201ENST00000516099 110 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.76□□□□□ -1.17
RAPGEF3O95398 AL109766.1-201ENST00000555080 552 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 AC106785.3-201ENST00000564064 847 ntBASIC7.76□□□□□ -1.17
RAPGEF3O95398 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms