Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MSI1O43347 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MSI1O43347 MTCO1P4-201ENST00000520516 1409 ntBASIC5.6□□□□□ -1.51
MSI1O43347 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MSI1O43347 RNU1-149P-201ENST00000390870 161 ntBASIC5.6□□□□□ -1.51
MSI1O43347 DBIP1-201ENST00000401435 260 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.6□□□□□ -1.51
MSI1O43347 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.6□□□□□ -1.51
MSI1O43347 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.6□□□□□ -1.51
MSI1O43347 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.6□□□□□ -1.51
MSI1O43347 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.6□□□□□ -1.51
MSI1O43347 FAM96AP1-201ENST00000430879 482 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC007563.3-201ENST00000433233 371 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC099670.2-201ENST00000435130 321 ntBASIC5.6□□□□□ -1.51
MSI1O43347 NDUFB4P8-201ENST00000435351 367 ntBASIC5.6□□□□□ -1.51
MSI1O43347 BUD31P2-201ENST00000449374 300 ntBASIC5.6□□□□□ -1.51
MSI1O43347 NPM1P19-201ENST00000450070 712 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.6□□□□□ -1.51
MSI1O43347 GLUD1P3-202ENST00000508551 200 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC091912.1-201ENST00000511351 248 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC111000.6-201ENST00000514471 709 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC034244.2-201ENST00000514668 858 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.6□□□□□ -1.51
MSI1O43347 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.6□□□□□ -1.51
MSI1O43347 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.6□□□□□ -1.51
MSI1O43347 AC093014.1-201ENST00000548926 724 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AL121594.4-201ENST00000556211 1196 ntBASIC5.6□□□□□ -1.51
MSI1O43347 HMGN2P47-201ENST00000559378 272 ntBASIC5.6□□□□□ -1.51
MSI1O43347 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.6□□□□□ -1.51
MSI1O43347 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.6□□□□□ -1.51
MSI1O43347 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.6□□□□□ -1.51
MSI1O43347 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.6□□□□□ -1.51
MSI1O43347 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.6□□□□□ -1.51
MSI1O43347 QTRT1P1-201ENST00000604344 1078 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AL512329.2-201ENST00000607350 548 ntBASIC5.6□□□□□ -1.51
MSI1O43347 MIR8084-201ENST00000614105 89 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC004808.1-201ENST00000627671 721 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC008993.2-201ENST00000631744 806 ntBASIC5.6□□□□□ -1.51
MSI1O43347 AC099654.8-201ENST00000637757 681 ntBASIC5.6□□□□□ -1.51
MSI1O43347 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.6□□□□□ -1.51
MSI1O43347 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MSI1O43347 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
MSI1O43347 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.6□□□□□ -1.51
MSI1O43347 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
MSI1O43347 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MSI1O43347 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MSI1O43347 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MSI1O43347 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.59□□□□□ -1.51
MSI1O43347 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 AL645568.2-201ENST00000432815 1337 ntBASIC5.59□□□□□ -1.51
MSI1O43347 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 RNU6-1000P-201ENST00000391066 106 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC007068.1-201ENST00000396690 844 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AP000534.2-201ENST00000412729 568 ntBASIC5.59□□□□□ -1.51
MSI1O43347 SETP9-201ENST00000423837 832 ntBASIC5.59□□□□□ -1.51
MSI1O43347 MTCO2P17-201ENST00000424336 677 ntBASIC5.59□□□□□ -1.51
MSI1O43347 NANOGP4-201ENST00000427230 913 ntBASIC5.59□□□□□ -1.51
MSI1O43347 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 RPL12P17-201ENST00000432393 498 ntBASIC5.59□□□□□ -1.51
MSI1O43347 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.59□□□□□ -1.51
MSI1O43347 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 MTND2P40-201ENST00000436718 841 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.59□□□□□ -1.51
MSI1O43347 AL645931.1-201ENST00000439737 410 ntBASIC5.59□□□□□ -1.51
MSI1O43347 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 AC245047.2-201ENST00000441060 530 ntBASIC5.59□□□□□ -1.51
MSI1O43347 CCRL1P1-201ENST00000449542 1053 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC104634.1-201ENST00000452720 462 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
MSI1O43347 ABCC13-202ENST00000463099 3842 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC104629.2-201ENST00000468627 598 ntBASIC5.59□□□□□ -1.51
MSI1O43347 NPM1P17-201ENST00000479221 602 ntBASIC5.59□□□□□ -1.51
MSI1O43347 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.59□□□□□ -1.51
MSI1O43347 AC058823.1-201ENST00000485315 474 ntBASIC5.59□□□□□ -1.51
MSI1O43347 HMGB1P3-201ENST00000502802 616 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC118282.1-201ENST00000506408 765 ntBASIC5.59□□□□□ -1.51
MSI1O43347 RNA5SP34-201ENST00000516887 130 ntBASIC5.59□□□□□ -1.51
MSI1O43347 SCARNA20.4-201ENST00000516969 131 ntBASIC5.59□□□□□ -1.51
MSI1O43347 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.59□□□□□ -1.51
MSI1O43347 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.59□□□□□ -1.51
MSI1O43347 OR4A43P-201ENST00000532938 908 ntBASIC5.59□□□□□ -1.51
MSI1O43347 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 AL049779.2-201ENST00000553847 315 ntBASIC5.59□□□□□ -1.51
MSI1O43347 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
MSI1O43347 AC051619.2-201ENST00000559063 397 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC005341.1-201ENST00000571086 708 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.59□□□□□ -1.51
MSI1O43347 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 AC010503.3-201ENST00000594355 540 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 AL096803.3-201ENST00000609032 532 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms