Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC010627.1-201ENST00000503819 1294 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC104108.1-201ENST00000509930 412 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 IGLV3-30-201ENST00000524362 298 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 OR8Q1P-201ENST00000526467 655 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 AC091078.2-201ENST00000557145 559 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC122134.1-201ENST00000565664 1104 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 LINC00556-201ENST00000569603 412 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 AC022884.3-201ENST00000579571 248 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC005244.1-201ENST00000582566 339 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 ELOCP35-201ENST00000604289 336 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 Z99289.3-201ENST00000605586 594 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC004908.3-201ENST00000610248 625 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AC092266.1-201ENST00000610958 165 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.73□□□□□ -1.49
PHGDHO43175 AL035661.1-201ENST00000620459 1144 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 AP003497.2-201ENST00000624220 967 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PHGDHO43175 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
PHGDHO43175 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 QRSL1P1-201ENST00000400977 1540 ntBASIC5.73□□□□□ -1.49
PHGDHO43175 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.73□□□□□ -1.49
PHGDHO43175 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PHGDHO43175 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PHGDHO43175 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PHGDHO43175 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 RNU4-68P-201ENST00000364314 141 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 RN7SKP171-201ENST00000364417 303 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 RN7SKP186-201ENST00000365371 303 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 AC016739.1-201ENST00000405359 345 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.72□□□□□ -1.49
PHGDHO43175 RPS7P9-201ENST00000414704 586 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.72□□□□□ -1.49
PHGDHO43175 MTND2P16-201ENST00000419987 799 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 OR2X1P-201ENST00000421144 687 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 VN1R21P-201ENST00000426703 765 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 DEFA9P-201ENST00000433042 285 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 AC099063.2-201ENST00000446360 662 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.72□□□□□ -1.49
PHGDHO43175 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.72□□□□□ -1.49
PHGDHO43175 DUTP1-201ENST00000493631 470 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 OR7E157P-201ENST00000494376 911 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 AC092349.1-201ENST00000504903 310 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC091874.2-201ENST00000505889 720 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.72□□□□□ -1.49
PHGDHO43175 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.72□□□□□ -1.49
PHGDHO43175 PRMT5P1-201ENST00000514351 598 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC083923.1-201ENST00000523708 376 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 HMGB1P42-201ENST00000532126 553 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.72□□□□□ -1.49
PHGDHO43175 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PHGDHO43175 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.72□□□□□ -1.49
PHGDHO43175 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.72□□□□□ -1.49
PHGDHO43175 AC002519.2-203ENST00000567043 837 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC023824.3-201ENST00000569003 562 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 MIR4776-2-201ENST00000580204 80 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.72□□□□□ -1.49
PHGDHO43175 CCDC58P3-201ENST00000590792 430 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.72□□□□□ -1.49
PHGDHO43175 AC015712.7-201ENST00000615211 635 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AL355493.4-201ENST00000618530 292 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 AC010975.3-201ENST00000618727 978 ntBASIC5.72□□□□□ -1.49
PHGDHO43175 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.72□□□□□ -1.49
PHGDHO43175 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms