Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CHD2O14647 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
CHD2O14647 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD2O14647 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CHD2O14647 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.81□□□□□ -1.32
CHD2O14647 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
CHD2O14647 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.81□□□□□ -1.32
CHD2O14647 AC092681.1-201ENST00000297369 291 ntBASIC6.8□□□□□ -1.32
CHD2O14647 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD2O14647 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD2O14647 AC090058.1-201ENST00000498788 435 ntBASIC6.8□□□□□ -1.32
CHD2O14647 AC020593.1-201ENST00000507399 299 ntBASIC6.8□□□□□ -1.32
CHD2O14647 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD2O14647 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD2O14647 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD2O14647 MIR7853-201ENST00000584820 132 ntBASIC6.8□□□□□ -1.32
CHD2O14647 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD2O14647 AC073091.2-201ENST00000603205 907 ntBASIC6.8□□□□□ -1.32
CHD2O14647 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD2O14647 AC010632.3-201ENST00000611377 369 ntBASIC6.8□□□□□ -1.32
CHD2O14647 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CHD2O14647 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD2O14647 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
CHD2O14647 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
CHD2O14647 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD2O14647 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.8□□□□□ -1.32
CHD2O14647 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD2O14647 MTND2P40-201ENST00000436718 841 ntBASIC6.8□□□□□ -1.32
CHD2O14647 YWHAZP2-201ENST00000440317 728 ntBASIC6.8□□□□□ -1.32
CHD2O14647 RPL23AP24-201ENST00000458203 385 ntBASIC6.8□□□□□ -1.32
CHD2O14647 IGKV3OR22-2-201ENST00000517943 313 ntBASIC6.8□□□□□ -1.32
CHD2O14647 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD2O14647 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD2O14647 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD2O14647 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHD2O14647 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 SALL4P2-201ENST00000423288 2910 ntBASIC6.79□□□□□ -1.32
CHD2O14647 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CHD2O14647 AC120338.1-201ENST00000625074 1541 ntBASIC6.79□□□□□ -1.32
CHD2O14647 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 AL050305.1-201ENST00000399993 1230 ntBASIC6.79□□□□□ -1.32
CHD2O14647 RPL7AP49-201ENST00000429522 581 ntBASIC6.79□□□□□ -1.32
CHD2O14647 AL591438.1-201ENST00000433508 581 ntBASIC6.79□□□□□ -1.32
CHD2O14647 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.79□□□□□ -1.32
CHD2O14647 MTCO1P35-201ENST00000515270 228 ntBASIC6.79□□□□□ -1.32
CHD2O14647 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.79□□□□□ -1.32
CHD2O14647 AL591034.3-201ENST00000605511 685 ntBASIC6.79□□□□□ -1.32
CHD2O14647 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 OR8B1P-202ENST00000641132 1178 ntBASIC6.79□□□□□ -1.32
CHD2O14647 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD2O14647 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.79□□□□□ -1.32
CHD2O14647 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHD2O14647 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.79□□□□□ -1.32
CHD2O14647 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CHD2O14647 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHD2O14647 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CHD2O14647 SNORA73.1-201ENST00000363107 205 ntBASIC6.78□□□□□ -1.32
CHD2O14647 RNU1-85P-201ENST00000364127 164 ntBASIC6.78□□□□□ -1.32
CHD2O14647 SNORA48.7-201ENST00000391302 135 ntBASIC6.78□□□□□ -1.32
CHD2O14647 LRRC37BP1-201ENST00000398851 714 ntBASIC6.78□□□□□ -1.32
CHD2O14647 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.78□□□□□ -1.32
CHD2O14647 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.78□□□□□ -1.32
CHD2O14647 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.78□□□□□ -1.32
CHD2O14647 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.78□□□□□ -1.32
CHD2O14647 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.78□□□□□ -1.32
CHD2O14647 AC073358.1-201ENST00000505671 684 ntBASIC6.78□□□□□ -1.32
CHD2O14647 RNA5SP143-201ENST00000516936 115 ntBASIC6.78□□□□□ -1.32
CHD2O14647 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.78□□□□□ -1.32
CHD2O14647 AC012409.3-201ENST00000611343 981 ntBASIC6.78□□□□□ -1.32
CHD2O14647 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.78□□□□□ -1.32
CHD2O14647 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHD2O14647 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CHD2O14647 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHD2O14647 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHD2O14647 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CHD2O14647 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CHD2O14647 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CHD2O14647 RNU1-82P-201ENST00000390851 165 ntBASIC6.78□□□□□ -1.32
CHD2O14647 AL357515.1-201ENST00000402967 542 ntBASIC6.78□□□□□ -1.32
CHD2O14647 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.78□□□□□ -1.32
CHD2O14647 RPL5P2-201ENST00000429598 854 ntBASIC6.78□□□□□ -1.32
CHD2O14647 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.78□□□□□ -1.32
CHD2O14647 TDGF1P1-201ENST00000445734 527 ntBASIC6.78□□□□□ -1.32
CHD2O14647 CYCSP34-201ENST00000458172 304 ntBASIC6.78□□□□□ -1.32
CHD2O14647 AC015795.1-201ENST00000513669 327 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms