Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CUX2O14529 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 AC016745.2-201ENST00000608834 3443 ntBASIC8.6□□□□□ -1.03
CUX2O14529 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
CUX2O14529 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 AC104964.3-201ENST00000606115 2860 ntBASIC8.6□□□□□ -1.03
CUX2O14529 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.6□□□□□ -1.03
CUX2O14529 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
CUX2O14529 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
CUX2O14529 RN7SKP202-201ENST00000410439 330 ntBASIC8.6□□□□□ -1.03
CUX2O14529 AF186996.5-201ENST00000418098 904 ntBASIC8.6□□□□□ -1.03
CUX2O14529 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC8.6□□□□□ -1.03
CUX2O14529 AL590399.2-201ENST00000427536 309 ntBASIC8.6□□□□□ -1.03
CUX2O14529 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.6□□□□□ -1.03
CUX2O14529 RPL23AP24-201ENST00000458203 385 ntBASIC8.6□□□□□ -1.03
CUX2O14529 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC8.6□□□□□ -1.03
CUX2O14529 AP001267.4-201ENST00000602598 545 ntBASIC8.6□□□□□ -1.03
CUX2O14529 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 AL591034.3-201ENST00000605511 685 ntBASIC8.6□□□□□ -1.03
CUX2O14529 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.6□□□□□ -1.03
CUX2O14529 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.6□□□□□ -1.03
CUX2O14529 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CUX2O14529 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
CUX2O14529 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CUX2O14529 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 AC120338.1-201ENST00000625074 1541 ntBASIC8.59□□□□□ -1.03
CUX2O14529 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
CUX2O14529 CYCSP11-201ENST00000436426 315 ntBASIC8.59□□□□□ -1.03
CUX2O14529 AC010733.1-201ENST00000451515 401 ntBASIC8.59□□□□□ -1.03
CUX2O14529 snoU13.29-201ENST00000459370 104 ntBASIC8.59□□□□□ -1.03
CUX2O14529 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.59□□□□□ -1.03
CUX2O14529 OR5D2P-201ENST00000524390 911 ntBASIC8.59□□□□□ -1.03
CUX2O14529 AC093014.1-201ENST00000548926 724 ntBASIC8.59□□□□□ -1.03
CUX2O14529 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.59□□□□□ -1.03
CUX2O14529 MIR492-201ENST00000638676 116 ntBASIC8.59□□□□□ -1.03
CUX2O14529 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.59□□□□□ -1.03
CUX2O14529 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 AC015799.1-201ENST00000622996 3122 ntBASIC8.59□□□□□ -1.03
CUX2O14529 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CUX2O14529 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC8.59□□□□□ -1.03
CUX2O14529 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
CUX2O14529 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CUX2O14529 5S_rRNA.1-201ENST00000364415 116 ntBASIC8.58□□□□□ -1.04
CUX2O14529 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC8.58□□□□□ -1.04
CUX2O14529 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CUX2O14529 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CUX2O14529 AC073465.2-201ENST00000440938 498 ntBASIC8.58□□□□□ -1.04
CUX2O14529 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
CUX2O14529 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.58□□□□□ -1.04
CUX2O14529 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC8.58□□□□□ -1.04
CUX2O14529 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.58□□□□□ -1.04
CUX2O14529 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.58□□□□□ -1.04
CUX2O14529 AC025884.1-201ENST00000556034 378 ntBASIC8.58□□□□□ -1.04
CUX2O14529 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
CUX2O14529 AC022146.1-201ENST00000595307 847 ntBASIC8.58□□□□□ -1.04
CUX2O14529 AC115286.1-201ENST00000604298 434 ntBASIC8.58□□□□□ -1.04
CUX2O14529 AC114781.5-201ENST00000615297 108 ntBASIC8.58□□□□□ -1.04
CUX2O14529 AC010329.1-201ENST00000593903 8328 ntBASIC8.58□□□□□ -1.04
CUX2O14529 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.58□□□□□ -1.04
CUX2O14529 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.58□□□□□ -1.04
CUX2O14529 AC073342.2-201ENST00000595842 1800 ntBASIC8.58□□□□□ -1.04
CUX2O14529 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.58□□□□□ -1.04
CUX2O14529 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
CUX2O14529 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.58□□□□□ -1.04
CUX2O14529 AC079097.1-201ENST00000512187 1399 ntBASIC8.58□□□□□ -1.04
CUX2O14529 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
CUX2O14529 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.58□□□□□ -1.04
CUX2O14529 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.57□□□□□ -1.04
CUX2O14529 CYCSP19-201ENST00000411715 316 ntBASIC8.57□□□□□ -1.04
CUX2O14529 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.57□□□□□ -1.04
CUX2O14529 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.57□□□□□ -1.04
CUX2O14529 FABP7P1-201ENST00000424004 391 ntBASIC8.57□□□□□ -1.04
CUX2O14529 NOP56P2-201ENST00000447491 769 ntBASIC8.57□□□□□ -1.04
CUX2O14529 RN7SL132P-201ENST00000478131 296 ntBASIC8.57□□□□□ -1.04
CUX2O14529 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.57□□□□□ -1.04
CUX2O14529 AC010350.1-201ENST00000504908 231 ntBASIC8.57□□□□□ -1.04
CUX2O14529 AC015795.1-201ENST00000513669 327 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 302.3 ms