Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC107021.2-201ENST00000567714 2095 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FOXN3O00409 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FOXN3O00409 RNU6-666P-201ENST00000363499 107 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 RNU5B-4P-201ENST00000363508 111 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
FOXN3O00409 RNU6-207P-201ENST00000384137 107 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
FOXN3O00409 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.96□□□□□ -1.46
FOXN3O00409 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC023128.2-201ENST00000420880 1223 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXN3O00409 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AL359265.1-201ENST00000440296 795 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC004854.1-201ENST00000440356 349 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AC097499.1-201ENST00000444277 208 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 MED28P3-201ENST00000444288 531 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AL096803.2-201ENST00000450032 677 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 LRRC37A14P-201ENST00000452297 462 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AL445665.1-202ENST00000452436 324 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 snoU109.3-201ENST00000459477 145 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 RN7SL583P-201ENST00000475692 287 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 SNORA19.3-201ENST00000516165 130 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 OR7E13P-201ENST00000526052 910 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AC079064.1-201ENST00000528365 362 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.96□□□□□ -1.46
FOXN3O00409 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXN3O00409 AL139124.1-201ENST00000609123 421 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AC007786.3-201ENST00000615154 596 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AC145207.9-201ENST00000623802 325 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 AC006927.4-201ENST00000639187 543 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FOXN3O00409 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXN3O00409 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
FOXN3O00409 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FOXN3O00409 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXN3O00409 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FOXN3O00409 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXN3O00409 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.96□□□□□ -1.46
FOXN3O00409 AC093775.1-201ENST00000624154 1868 ntBASIC5.96□□□□□ -1.46
FOXN3O00409 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC093671.1-201ENST00000624981 2929 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 MRRFP1-201ENST00000435941 1675 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXN3O00409 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 RN7SKP145-201ENST00000363291 303 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 RNU6-452P-201ENST00000384406 107 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 OR13Z1P-201ENST00000416141 834 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 YWHAZP2-201ENST00000440317 728 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.95□□□□□ -1.46
FOXN3O00409 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 DUXAP8-207ENST00000456786 622 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 RN7SL188P-201ENST00000469842 285 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AC020779.1-201ENST00000478757 796 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 EIF1P7-201ENST00000487533 337 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 AC108729.1-201ENST00000487812 947 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 UBE2V1P12-201ENST00000503954 474 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC021106.1-201ENST00000509020 1058 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 SNORA70.11-201ENST00000515987 138 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 SNORA70.13-201ENST00000516116 138 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 RN7SKP70-201ENST00000516655 271 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 SEPT10P1-201ENST00000517342 1162 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXN3O00409 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
FOXN3O00409 AC118942.1-201ENST00000529674 1035 ntBASIC5.95□□□□□ -1.46
FOXN3O00409 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXN3O00409 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms