Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 MIR718-201ENST00000390190 70 ntBASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
GTF3C4Q9UKN8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 AC116562.4-201ENST00000641316 2276 ntBASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GTF3C4Q9UKN8 AC116351.2-201ENST00000606540 1585 ntBASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 AP001271.2-201ENST00000624018 1556 ntBASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
GTF3C4Q9UKN8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
GTF3C4Q9UKN8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 AC018553.1-201ENST00000616682 1458 ntBASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 RPS2P55-201ENST00000397318 883 ntBASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 AC107956.1-201ENST00000494359 873 ntBASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GTF3C4Q9UKN8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms