Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KIAA1549Q9HCM3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 KSR1P1-201ENST00000446298 240 ntBASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 RN7SL850P-201ENST00000579959 291 ntBASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 CR392000.1-201ENST00000624770 1228 ntBASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KIAA1549Q9HCM3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 RCN1P1-201ENST00000400413 996 ntBASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KIAA1549Q9HCM3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 AL355355.2-201ENST00000442321 338 ntBASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.47■□□□□ 0.39
KIAA1549Q9HCM3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 UNC93B2-201ENST00000285383 730 ntBASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 KRT18P16-201ENST00000510337 1294 ntBASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 AP000525.1-201ENST00000608286 694 ntBASIC17.46■□□□□ 0.39
KIAA1549Q9HCM3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KIAA1549Q9HCM3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms