Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
USP44Q9H0E7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.49■■□□□ 1.51
USP44Q9H0E7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
USP44Q9H0E7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
USP44Q9H0E7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
USP44Q9H0E7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
USP44Q9H0E7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 AP001412.1-201ENST00000608405 714 ntBASIC24.48■■□□□ 1.51
USP44Q9H0E7 AL445675.2-201ENST00000620291 557 ntBASIC24.48■■□□□ 1.51
USP44Q9H0E7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.48■■□□□ 1.51
USP44Q9H0E7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP44Q9H0E7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP44Q9H0E7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP44Q9H0E7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP44Q9H0E7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
USP44Q9H0E7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.47■■□□□ 1.51
USP44Q9H0E7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
USP44Q9H0E7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.46■■□□□ 1.51
USP44Q9H0E7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
USP44Q9H0E7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
USP44Q9H0E7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
USP44Q9H0E7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.45■■□□□ 1.51
USP44Q9H0E7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP44Q9H0E7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP44Q9H0E7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP44Q9H0E7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
USP44Q9H0E7 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.45■■□□□ 1.5
USP44Q9H0E7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.45■■□□□ 1.5
USP44Q9H0E7 CR392000.1-201ENST00000624770 1228 ntBASIC24.45■■□□□ 1.5
USP44Q9H0E7 LINC01465-201ENST00000408887 1940 ntBASIC24.45■■□□□ 1.5
USP44Q9H0E7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
USP44Q9H0E7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
USP44Q9H0E7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
USP44Q9H0E7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
USP44Q9H0E7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 AL158211.5-201ENST00000623583 2518 ntBASIC24.43■■□□□ 1.5
USP44Q9H0E7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
USP44Q9H0E7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
USP44Q9H0E7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
USP44Q9H0E7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 AC004980.1-204ENST00000429707 299 ntBASIC24.43■■□□□ 1.5
USP44Q9H0E7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.43■■□□□ 1.5
USP44Q9H0E7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
USP44Q9H0E7 KRT16P1-201ENST00000399124 1418 ntBASIC24.43■■□□□ 1.5
USP44Q9H0E7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
USP44Q9H0E7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
USP44Q9H0E7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.42■■□□□ 1.5
USP44Q9H0E7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP44Q9H0E7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.42■■□□□ 1.5
USP44Q9H0E7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
USP44Q9H0E7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.42■■□□□ 1.5
USP44Q9H0E7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms