Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.37■□□□□ 0.85
SCML4Q8N228 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.37■□□□□ 0.85
SCML4Q8N228 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.37■□□□□ 0.85
SCML4Q8N228 KRT16P1-201ENST00000399124 1418 ntBASIC20.37■□□□□ 0.85
SCML4Q8N228 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SCML4Q8N228 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.37■□□□□ 0.85
SCML4Q8N228 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.37■□□□□ 0.85
SCML4Q8N228 AC026271.3-201ENST00000571884 352 ntBASIC20.37■□□□□ 0.85
SCML4Q8N228 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 CD177P1-201ENST00000606252 935 ntBASIC20.37■□□□□ 0.85
SCML4Q8N228 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SCML4Q8N228 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCML4Q8N228 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.36■□□□□ 0.85
SCML4Q8N228 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SCML4Q8N228 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SCML4Q8N228 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SCML4Q8N228 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.36■□□□□ 0.85
SCML4Q8N228 MIR4497-201ENST00000583208 89 ntBASIC20.36■□□□□ 0.85
SCML4Q8N228 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.36■□□□□ 0.85
SCML4Q8N228 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.36■□□□□ 0.85
SCML4Q8N228 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCML4Q8N228 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.36■□□□□ 0.85
SCML4Q8N228 AC073130.3-201ENST00000624389 2278 ntBASIC20.36■□□□□ 0.85
SCML4Q8N228 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.35■□□□□ 0.85
SCML4Q8N228 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.35■□□□□ 0.85
SCML4Q8N228 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCML4Q8N228 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCML4Q8N228 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.35■□□□□ 0.85
SCML4Q8N228 AC004980.1-204ENST00000429707 299 ntBASIC20.35■□□□□ 0.85
SCML4Q8N228 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.35■□□□□ 0.85
SCML4Q8N228 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.35■□□□□ 0.85
SCML4Q8N228 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SCML4Q8N228 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.35■□□□□ 0.85
SCML4Q8N228 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.35■□□□□ 0.85
SCML4Q8N228 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.35■□□□□ 0.85
SCML4Q8N228 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCML4Q8N228 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.35■□□□□ 0.85
SCML4Q8N228 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
SCML4Q8N228 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.35■□□□□ 0.85
SCML4Q8N228 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCML4Q8N228 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCML4Q8N228 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
SCML4Q8N228 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.34■□□□□ 0.85
SCML4Q8N228 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SCML4Q8N228 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SCML4Q8N228 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SCML4Q8N228 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.34■□□□□ 0.85
SCML4Q8N228 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
SCML4Q8N228 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.34■□□□□ 0.85
SCML4Q8N228 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCML4Q8N228 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SCML4Q8N228 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCML4Q8N228 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.33■□□□□ 0.85
SCML4Q8N228 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCML4Q8N228 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms