Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
LBX1P52954 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LBX1P52954 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LBX1P52954 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
LBX1P52954 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LBX1P52954 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.25■■□□□ 1.15
LBX1P52954 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
LBX1P52954 AKR1C7P-201ENST00000305623 895 ntBASIC22.24■■□□□ 1.15
LBX1P52954 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.24■■□□□ 1.15
LBX1P52954 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.24■■□□□ 1.15
LBX1P52954 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 RNPS1P1-201ENST00000507437 918 ntBASIC22.24■■□□□ 1.15
LBX1P52954 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.24■■□□□ 1.15
LBX1P52954 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.24■■□□□ 1.15
LBX1P52954 AL162741.1-201ENST00000565563 1558 ntBASIC22.24■■□□□ 1.15
LBX1P52954 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LBX1P52954 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
LBX1P52954 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
LBX1P52954 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.23■■□□□ 1.15
LBX1P52954 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.23■■□□□ 1.15
LBX1P52954 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.23■■□□□ 1.15
LBX1P52954 AC034232.1-201ENST00000506026 1064 ntBASIC22.23■■□□□ 1.15
LBX1P52954 AL773604.1-201ENST00000617417 272 ntBASIC22.23■■□□□ 1.15
LBX1P52954 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.23■■□□□ 1.15
LBX1P52954 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.23■■□□□ 1.15
LBX1P52954 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LBX1P52954 KRT8P17-201ENST00000453110 1448 ntBASIC22.23■■□□□ 1.15
LBX1P52954 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
LBX1P52954 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.22■■□□□ 1.15
LBX1P52954 AP001160.2-201ENST00000596071 487 ntBASIC22.22■■□□□ 1.15
LBX1P52954 AL390719.2-201ENST00000606993 987 ntBASIC22.22■■□□□ 1.15
LBX1P52954 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.22■■□□□ 1.15
LBX1P52954 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.22■■□□□ 1.15
LBX1P52954 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
LBX1P52954 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.22■■□□□ 1.15
LBX1P52954 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LBX1P52954 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LBX1P52954 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
LBX1P52954 AC093525.10-201ENST00000625130 1569 ntBASIC22.21■■□□□ 1.15
LBX1P52954 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
LBX1P52954 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LBX1P52954 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.21■■□□□ 1.15
LBX1P52954 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LBX1P52954 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
LBX1P52954 TSPY22P-201ENST00000427496 604 ntBASIC22.21■■□□□ 1.15
LBX1P52954 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.21■■□□□ 1.15
LBX1P52954 AC104819.1-201ENST00000504587 486 ntBASIC22.21■■□□□ 1.15
LBX1P52954 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.21■■□□□ 1.15
LBX1P52954 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.21■■□□□ 1.15
LBX1P52954 TP73-AS1-207ENST00000624167 988 ntBASIC22.21■■□□□ 1.15
LBX1P52954 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LBX1P52954 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LBX1P52954 AC080038.3-201ENST00000623346 1952 ntBASIC22.21■■□□□ 1.15
LBX1P52954 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LBX1P52954 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.21■■□□□ 1.15
LBX1P52954 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.2■■□□□ 1.15
LBX1P52954 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LBX1P52954 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
LBX1P52954 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LBX1P52954 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
LBX1P52954 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LBX1P52954 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC22.2■■□□□ 1.14
LBX1P52954 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.2■■□□□ 1.14
LBX1P52954 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.2■■□□□ 1.14
LBX1P52954 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
LBX1P52954 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LBX1P52954 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.2■■□□□ 1.14
LBX1P52954 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.19■■□□□ 1.14
LBX1P52954 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
LBX1P52954 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LBX1P52954 RPS8P6-201ENST00000426177 609 ntBASIC22.19■■□□□ 1.14
LBX1P52954 HTR5BP-201ENST00000430851 1154 ntBASIC22.19■■□□□ 1.14
LBX1P52954 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LBX1P52954 AC098831.1-202ENST00000438821 336 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms