Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
GFRA3O60609 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 Z85996.1-201ENST00000494644 937 ntBASIC19.07■□□□□ 0.64
GFRA3O60609 AC034232.1-201ENST00000506026 1064 ntBASIC19.07■□□□□ 0.64
GFRA3O60609 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.07■□□□□ 0.64
GFRA3O60609 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.07■□□□□ 0.64
GFRA3O60609 AC106730.1-201ENST00000566722 1090 ntBASIC19.07■□□□□ 0.64
GFRA3O60609 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.07■□□□□ 0.64
GFRA3O60609 AC138894.3-201ENST00000603787 634 ntBASIC19.07■□□□□ 0.64
GFRA3O60609 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.06■□□□□ 0.64
GFRA3O60609 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.06■□□□□ 0.64
GFRA3O60609 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.06■□□□□ 0.64
GFRA3O60609 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 RNPS1P1-201ENST00000507437 918 ntBASIC19.06■□□□□ 0.64
GFRA3O60609 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.06■□□□□ 0.64
GFRA3O60609 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.06■□□□□ 0.64
GFRA3O60609 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.06■□□□□ 0.64
GFRA3O60609 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.06■□□□□ 0.64
GFRA3O60609 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.06■□□□□ 0.64
GFRA3O60609 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
GFRA3O60609 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.06■□□□□ 0.64
GFRA3O60609 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.05■□□□□ 0.64
GFRA3O60609 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
GFRA3O60609 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.05■□□□□ 0.64
GFRA3O60609 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.05■□□□□ 0.64
GFRA3O60609 FAM99A-202ENST00000538190 1989 ntBASIC19.05■□□□□ 0.64
GFRA3O60609 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GFRA3O60609 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GFRA3O60609 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.05■□□□□ 0.64
GFRA3O60609 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.05■□□□□ 0.64
GFRA3O60609 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 TOB2P1-201ENST00000469761 992 ntBASIC19.05■□□□□ 0.64
GFRA3O60609 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
GFRA3O60609 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
GFRA3O60609 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
GFRA3O60609 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 AC055717.3-201ENST00000622967 595 ntBASIC19.05■□□□□ 0.64
GFRA3O60609 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GFRA3O60609 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
GFRA3O60609 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
GFRA3O60609 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
GFRA3O60609 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.04■□□□□ 0.64
GFRA3O60609 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
GFRA3O60609 HTR5BP-201ENST00000430851 1154 ntBASIC19.04■□□□□ 0.64
GFRA3O60609 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.04■□□□□ 0.64
GFRA3O60609 RNA5SP419-201ENST00000515908 135 ntBASIC19.04■□□□□ 0.64
GFRA3O60609 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.04■□□□□ 0.64
GFRA3O60609 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.04■□□□□ 0.64
GFRA3O60609 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GFRA3O60609 AL773604.1-201ENST00000617417 272 ntBASIC19.04■□□□□ 0.64
GFRA3O60609 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.04■□□□□ 0.64
GFRA3O60609 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.04■□□□□ 0.64
GFRA3O60609 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GFRA3O60609 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
GFRA3O60609 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.03■□□□□ 0.64
GFRA3O60609 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.03■□□□□ 0.64
GFRA3O60609 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.03■□□□□ 0.64
GFRA3O60609 AC073648.2-201ENST00000510116 352 ntBASIC19.03■□□□□ 0.64
GFRA3O60609 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.03■□□□□ 0.64
GFRA3O60609 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
GFRA3O60609 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GFRA3O60609 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms