Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SL205P-201ENST00000490174 284 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC093770.1-201ENST00000511559 571 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 CDC42P3-201ENST00000518493 633 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 MRPS21P7-201ENST00000566937 238 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 SUGT1P3-202ENST00000604259 383 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AL512329.2-201ENST00000607350 548 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC084824.4-201ENST00000620106 731 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC018445.2-201ENST00000622987 260 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 AC079776.5-201ENST00000641920 211 ntBASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX2IPQ9Y2D8 TCP11X1-202ENST00000622971 1372 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC235565.1-201ENST00000456962 1325 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 EI24P3-201ENST00000399046 1062 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 RANP4-201ENST00000413361 655 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 SLC35E1P1-201ENST00000419313 864 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 MTCO2P23-201ENST00000425216 680 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC245517.2-201ENST00000442890 346 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 BUD31P2-201ENST00000449374 300 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC079080.1-201ENST00000479841 822 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC034205.1-201ENST00000520621 638 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 HAUS8P1-201ENST00000549005 542 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL049779.2-201ENST00000553847 315 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL163952.1-202ENST00000569625 600 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 MTATP6P24-201ENST00000576835 677 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AL445435.1-201ENST00000604232 665 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC016769.4-201ENST00000616893 535 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC132068.1-201ENST00000623805 459 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 AC007938.2-201ENST00000604666 2634 ntBASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SSX2IPQ9Y2D8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 FBXL21-201ENST00000297158 1305 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 PABPC1P6-201ENST00000445594 1829 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 MIR16-2-201ENST00000362117 81 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 RN7SKP28-201ENST00000364770 305 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 RNA5SP30-201ENST00000365552 115 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 SNORA70-201ENST00000384436 135 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 Z86062.1-201ENST00000406773 777 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 NENFP1-201ENST00000419476 466 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 VN1R21P-201ENST00000426703 765 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 RPS27P18-201ENST00000431701 247 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 RPL7P45-201ENST00000455851 743 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms